Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02592 ATGCCGAAGCCTTGTGACTTGCAAATCAACATCGATGGTCAGCAGATATTTCTCTTGAAAGAGAAGGTTATTTCAAAATACTGTGGAGGGTTGAAGAAAATCTTGAATCACAGAAAGAGAAGAGGTCATGGGAAGCAGGAGTTAGGGATTAGGATCAATGATTTTCCTGGAGGACCAGAAGGGTTTGAGCTAGTTTCAATGTTCTGTTACAATAATGGAAAAATACAAATCACTGAAGCTAATGTGTGTCTTTTACACTGTTGTGCTGTTTATCTCGGAATGACTGAGGAAATACTCAGCAACAATCTGTTGCAGCAAACAGAAACATTTCTTGAGAGAATCTTCAACTGGGAATGGAGTGACACACTTGTGATTCTCAAGAGTTGCGAGCGGTTTTATGCATATGCAGATGGTTATGGTCTATTGGAGAAGATCATCAGTGTCTTAGCCAAGTTTGTGCAGAATTCAGATTCAAACCTCCTCATGTCATCATCACCTTCAGCATCATCATCATCTTCTTCACCAGATACCAATTCTGCTAAAAGATTCTCTTTTTCATCCAAGAAAACTACCCCAGAGAAATTAAAGTCAACTTTGTCACGCAAGGCATGGTGGTTTGATGATTTGGCAACTTTACCACCAAACATCATTGAGAAACTTGTCCAGGCCATAGGAGCATACAAAGCTGATAACAAAGATTTAGCCCTCACAAGATTTCTGCTGCATTATCTGAAACTAGCCACTCAAACAAGAGTGGTTAATTGCAGCAACAACAGTGAGTATGGTGCTCTTGCAGAAACTGCAACTTATGGGGTGATATCTGTTGGAAAAAAGATGTTTTCTTGCAGAGGCCTTTTTTGGGTTTTGAGGATTGTATCAAAGTTTGGGTTGAGTAGAGATGTTAGAAGAGAATTGGAGAAAGTGATTGGTGGGGTGATTGAGGAAGCTACACTGGATGATCTTCTGGTTTCTGGGCATGACATGGGAGTTTATTATGACATTAATTTGGTGATAAGATTGGTTAGGGTTTTTGTTGATATGAATGGTTCTGATTCTGATGATGGAATGTGTTTACAGAAACAGAAAAGGGTTGGTAGATTAATTGACAAGTATTTGAGAGAGATATCTCCTGATCAGAACCTCAAGATCTCTAAGTTTCTTGGAGTAGCAGAATGTTTGCCAGACTCAGCAAGGGATTGCTATGATGGAGTCTATAAAGCCATTGATATCTATCTTCAGTCTCATCCAAGTATCACATTTGAGGAAAGAACGAGACTGTGTAGATGTCTTAATTACAGCAAGCTCACCTTTGAAGCAAGTAAAGATCTGGCCAAGAACCCCAGAATACCTCCGAGGGTTGCAATGCAGGCTCTTATTTCTCAACAATCAAAAGTTCCGACAACTGATTACGTAACTGAGACTCCAAGAGTGAAACCTTCCCAATTAGTATTGTACAATGAAAAAACCAGAAACAGCATCACCCAAGAGAAAAAAGACATGGAACTGAACATAGACAAGATGCAGTGGGGAGTAATAGAACTGGCGAAATTACACAAGGAAATGAACAATCACGTATCGAAGTTGATCTTGCTTGATCCTGCTCGTACTTCATCCTCACCAAGATTTTGTTGA 1632 0.3971 MPKPCDLQINIDGQQIFLLKEKVISKYCGGLKKILNHRKRRGHGKQELGIRINDFPGGPEGFELVSMFCYNNGKIQITEANVCLLHCCAVYLGMTEEILSNNLLQQTETFLERIFNWEWSDTLVILKSCERFYAYADGYGLLEKIISVLAKFVQNSDSNLLMSSSPSASSSSSSPDTNSAKRFSFSSKKTTPEKLKSTLSRKAWWFDDLATLPPNIIEKLVQAIGAYKADNKDLALTRFLLHYLKLATQTRVVNCSNNSEYGALAETATYGVISVGKKMFSCRGLFWVLRIVSKFGLSRDVRRELEKVIGGVIEEATLDDLLVSGHDMGVYYDINLVIRLVRVFVDMNGSDSDDGMCLQKQKRVGRLIDKYLREISPDQNLKISKFLGVAECLPDSARDCYDGVYKAIDIYLQSHPSITFEERTRLCRCLNYSKLTFEASKDLAKNPRIPPRVAMQALISQQSKVPTTDYVTETPRVKPSQLVLYNEKTRNSITQEKKDMELNIDKMQWGVIELAKLHKEMNNHVSKLILLDPARTSSSPRFC 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02592 543 SUPERFAMILY POZ domain 3 96 IPR011333 -
Viun11g02592 543 MobiDBLite consensus disorder prediction 164 185 - -
Viun11g02592 543 PANTHER OS12G0117600 PROTEIN 4 516 IPR043454 -
Viun11g02592 543 Pfam NPH3 family 204 440 IPR027356 -
Viun11g02592 543 ProSiteProfiles NPH3 domain profile. 203 464 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02592 Viun-Chr11 39000694 39003982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02592 6 468 EF-hand Containing Proteins AT3G44820 27.451 5.21e-50 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02592 - - gmx:100808259 870.537