Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02586 ATGGCGGCAGAGTCAAACGCTGGATTTCACAGTGAAGGTATAGATTCTGTTTTGAACAGGCGGGCCATATCATTTCAACCCGGTGGTGCTATTAACCGGCTGTCAGAGATGGTTCCAATGGGTAATTATTTTGGGCTAAGTAGTTCATCTGGGATGATATATTCTGGGAATTCAACCATCATTAACAGTAATCCTGTGATGAGTCAAGCCGGTAACCCATCAAGTTCTTCGCTTCTTCTCGATTCGGTTCCAGGACTGAAGCATGACACAGGTTTGGCTGTTGAGTGGTCTGTTGATGAACAGTACAGATTGGAAGAAGGCCTTGCCAAGTATGCTGAGGAACCAAGTATCATGAGGTATATCAAAATTGCTGCCCTGTTGCCTGATAAAACTGTTCGAGATGTTGCTTTGAGGTGTAGATGGTTGACAAGAAAGCGAAGGAAATCAGAAGAACACATTCTTGGAAAGAAGGTCCATAACAGAAAGGATAAGCCTGTGGAGTTAGCATCAAAGTCAAATTTACATTCGCCTCTGCCTCCAAGCATGGCTACATATTCTCGCATGTCACACCATATGGACCAAACTCAACGGATACAATATGATGGAATTTGTAGTCCTTTGAAGCAACTCATGGAGCAGAATGCTCAAGCTTTTAATCAAATCACTGCCAATTTGTCTACTTACAAGTTGCAGGATAACATCGACCTCTTTTGCCATACTAGGCAAAATATTAATACCATTCTTAATGATATGAGAGTGATGCCTGGGATTATGAGCCAAATGCCACCACTGCCTGTCGCCATTAACGAGGATCTTGCTAGTAGTATTTTGCCTAATAGAACATAG 846 0.4243 MAAESNAGFHSEGIDSVLNRRAISFQPGGAINRLSEMVPMGNYFGLSSSSGMIYSGNSTIINSNPVMSQAGNPSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEGLAKYAEEPSIMRYIKIAALLPDKTVRDVALRCRWLTRKRRKSEEHILGKKVHNRKDKPVELASKSNLHSPLPPSMATYSRMSHHMDQTQRIQYDGICSPLKQLMEQNAQAFNQITANLSTYKLQDNIDLFCHTRQNINTILNDMRVMPGIMSQMPPLPVAINEDLASSILPNRT 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02586 281 Pfam Protein of unknown function (DUF3755) 227 260 IPR022228 -
Viun11g02586 281 CDD SANT 95 140 IPR001005 -
Viun11g02586 281 SUPERFAMILY Homeodomain-like 84 149 IPR009057 -
Viun11g02586 281 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 57 278 - -
Viun11g02586 281 Gene3D - 92 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02586 Viun-Chr11 38964455 38970353 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02586 - - gmx:100807371 507.294