Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02564 ATGTTTCAACAAAATTCATTCTACCCACAAGTCGATTCCACAAATCCAGACGCTGATTCTCCCTTTTCCCACCATTCATCGTCATCTTCTTCCATTTATCCTTCAGTAGAAACAGAGAATCTCATTAGAGAAGAGCCAAACGCGACAGAAGCCATGGAAAACGTTCTCGTCACGGTTCCGGGTGCGATTCTGCATCTCATAGAAAAGGAGTCAAGCGTGCACCTCGCTTCGGGGAACCTCACCATATCCAGCCTCGGAGAAGGGGACAAAGTGGTGGCTGTTCTCGCTCGCGTCGGCGATAAGGTTCAGTGGCCGTTGGCCAAGGACGTGGCGGCGGTGAAGCTGGACGAGTCGCACTACTTCTTCACGCTGCAAGTTCCACAGAAACAGGCGGAGAACGGATTTGAGGTGCTGAATTATGGGTTGACGGTGGCGGCGAAGGGGCAAGAGAAGGTGCTGAGGGAACTGGACGGGGTTCTGGAGAAGTATAGCTTTCTGTCGAAGGAGAAAGTGAAGGGTGTGAGTGGATGGGAGGTGTTGGATGGTTCAGTCACAACAGAGACATCACCTGAAGAATTAAAATCAGAGGAGAAGAGGGAAGTGATCGAAGAGCGTTCTGGTGCTTATTGGACGACGTTGGCGCCAAACGTGGAGGATTACAGTGGGCGTTTTGCGAGGTGGATTGCTGCCGGGTCGGGTCATGTTATCAGGGGGATTTTGTGGGCTGGGGATGTTACTGTGGAGAGGTTGAAGTGGGGGAATGATTTCATGAAGAAGAGATTGGAGCCTGGTTCCCAGTCCCAGATTAGTCCTCAGGCATTGGAGAATATGAAAAGGGTGAAGAAGTTGACCAAGATGTCAGAGAAAGTAGCCACCGGTGTCCTCTCTGGGGTTGTCAAAGTGTCGGGATTCTTCACAAGCTCTGTAGTCAACTCCAAACCCGGAAAGAAGTTCTTTAGTCTTCTTCCTGGAGAAATCGTCCTTGCTACCATGGATGGATTCAATAAGGTGGTGGATGCTGTAGAAGTAGCTGGGAGGAATGTTATGTCCACTTCGTCATCTGTGACCACTGAACTCGTTTCACATAGGTATGGAGAGCAAGCAGCCCAGGTTGCTAATGAAGGCCTTGACGCCGCAGGGCATGCAATTGGGACAGCTTGGGCAGTGTTCAAACTTAGGAAGGCACTCAACCCCAAGAGTGTGATCAAGCCAACAACACTAGCCAAAGCTGCTGCTGAAGCAAATTCTGTCAAACTGAAGGCTAAGAAATGA 1272 0.5016 MFQQNSFYPQVDSTNPDADSPFSHHSSSSSSIYPSVETENLIREEPNATEAMENVLVTVPGAILHLIEKESSVHLASGNLTISSLGEGDKVVAVLARVGDKVQWPLAKDVAAVKLDESHYFFTLQVPQKQAENGFEVLNYGLTVAAKGQEKVLRELDGVLEKYSFLSKEKVKGVSGWEVLDGSVTTETSPEELKSEEKREVIEERSGAYWTTLAPNVEDYSGRFARWIAAGSGHVIRGILWAGDVTVERLKWGNDFMKKRLEPGSQSQISPQALENMKRVKKLTKMSEKVATGVLSGVVKVSGFFTSSVVNSKPGKKFFSLLPGEIVLATMDGFNKVVDAVEVAGRNVMSTSSSVTTELVSHRYGEQAAQVANEGLDAAGHAIGTAWAVFKLRKALNPKSVIKPTTLAKAAAEANSVKLKAKK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02564 423 MobiDBLite consensus disorder prediction 1 37 - -
Viun11g02564 423 Coils Coil 407 423 - -
Viun11g02564 423 PANTHER SPARTIN 4 416 IPR045036 -
Viun11g02564 423 MobiDBLite consensus disorder prediction 1 38 - -
Viun11g02564 423 Pfam Senescence domain 226 412 IPR009686 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02564 Viun-Chr11 38818862 38820646 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02564 K19366 - gmx:100802385 691.804