Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02497 ATGGATGCTATCAGAAAGCAAGCCTCCAAGCTTCGAGAACAAGTCGCTCGCCAGCAACAGGCTGTTCTGAAGCAATTTGGGGGTGGTGGTTATGGAGGTTCAGATAATGTGGCTACCAATGGAGTGGAACTCCAGTTGCACCAGAAACTTGAGAAACTCTATATATCGACTCGTGCGGGGAAGCATTATCAAAGGGATTTTGTTCGTGGTGTAGAAGGTTATATTGTTACTGGGTCCAAGCAAGTGGAAATAGGAACAAAGTTGTCAGAAGATAGCAGGAAATATGGTGCAGAAAATACGTGTACCAGTGGTAATACACTGAGTAGAGCTGCACTAAGTTTTGCGCAAGCACATGCTCAAACGGAGAAGGAGCGTGGAAACCTACTAAAAGCTCTTGGTACACAGGTTGCAGAGCCCTTAAGGGCAATGGTGGTGGGAGCTCCATTGGAGGATGCACGGCATCTTGCTCAACGTTATGACAGAATGCGGCAAGAAGCTGAAGCACAGGCTATTGAAGTTTCCAAACGCCAGGCTAGAGTAAGAGAAATGCCACCCAGTGCTGAGAATTCTATGAAATTAGAAGCAGCTGAAGCAAAGCTGCAAGATCTGAAGGCAAACACGACCATACTGGGGAAGGAAGCAGCTGCAGCATTGGCTGCTGTTGAAGCACAGCAACAGAGGCTAACTCTTCAGCGTCTTATAGCTATGGTTGAAGCAGAGCGTGCCTATCATCAAACAGTCCTGCAAATACTTGATCAGCTTGAGGGGGAGATGATATCAGAACAACGACGAATTGAAACCCCTCCTATTCCTCCTAGTCTGGATAACGACATGCCACCACCTCCGTCTTATGAAGAAGTGAATGGTGTCTACGCATCTCAGGCACATAATGGAACAACAGATAGCATGGGTTACTTCTTAGGGGAGGTTTTATTTCCATATTCTGCTGTATCCGAAGTGGAGCTAAATCTATCAGTTGGTGATTACATTGTTGTTCGAAAGGTGACAAATAGCGGATGGGCCGAGGGCGAATGCAAAGGCAGGGCAGGTTGGTTTCCGTTTAGTTACATTGAAAGGAGGGAACGGGTTCTTGCAAGTAAGGTGGCTGAAGTGTTTTAA 1119 0.4656 MDAIRKQASKLREQVARQQQAVLKQFGGGGYGGSDNVATNGVELQLHQKLEKLYISTRAGKHYQRDFVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGNTLSRAALSFAQAHAQTEKERGNLLKALGTQVAEPLRAMVVGAPLEDARHLAQRYDRMRQEAEAQAIEVSKRQARVREMPPSAENSMKLEAAEAKLQDLKANTTILGKEAAAALAAVEAQQQRLTLQRLIAMVEAERAYHQTVLQILDQLEGEMISEQRRIETPPIPPSLDNDMPPPPSYEEVNGVYASQAHNGTTDSMGYFLGEVLFPYSAVSEVELNLSVGDYIVVRKVTNSGWAEGECKGRAGWFPFSYIERRERVLASKVAEVF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02497 372 SUPERFAMILY SH3-domain 305 360 IPR036028 GO:0005515
Viun11g02497 372 Coils Coil 1 21 - -
Viun11g02497 372 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Viun11g02497 372 Coils Coil 220 240 - -
Viun11g02497 372 Pfam Variant SH3 domain 310 358 IPR001452 GO:0005515
Viun11g02497 372 Coils Coil 186 213 - -
Viun11g02497 372 SMART SH3_2 306 361 IPR001452 GO:0005515
Viun11g02497 372 Gene3D SH3 Domains 303 362 - -
Viun11g02497 372 PANTHER SH3 DOMAIN-CONTAINING 16 360 - -
Viun11g02497 372 SUPERFAMILY BAR/IMD domain-like 45 258 IPR027267 -
Viun11g02497 372 ProSiteProfiles Src homology 3 (SH3) domain profile. 303 362 IPR001452 GO:0005515
Viun11g02497 372 Coils Coil 149 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02497 Viun-Chr11 38441303 38444894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02497 - - gmx:100777051 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02497 11 38441303 38444894 Viun11g02497 11 38441303 38444894 ECH