Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02494 ATGGCATTCAAACTCAAACCGCTACTTCTTCCTTCCTATCTTCACTCCTCTCCCCGCCAAAACCCTAATTTCACGCTTTCAAACCATCGTCTTCCTCGATTTTTCTCTGCACATTCTCTTCCTTTCGGTCTCTCCCTCTCAAACACAGCTTCAGCATCCACGTATCATCGCAACGCCTTCGTAACCGCTCGCGCATTTCGAAGTGATGAAATCGCGAACGAAGGTGAAGAAGAAGAAAAGGAAGAACGAATATCGACGCAGGGTGAGAAAAAGGAACTAGCGAATCGAGGGATATTGGATCAGATAAAGGAAATTGTGATGTTTACAGGTCCAGCAACCGGACTTTGGATATGTGCACCACTCATGAGTCTCATTGATACTGCAATTATTGGTCAGAGAAGCTCCATTGAACTTGCTGCTCTAGGTCCTGCCACTGTTGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCAATTGCCACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGACAAACAAGAAGTGCAACATCACATATCTATCTTGGTTTTTGTTGGGTTATCTTGTGGCGTTGTGATGCTTTTGTTCACAAGGCTATTTGGTGCTGCAATAATAACTGCTTTCACTGGATCAAAGAATGCACACATAGTACCTGCAGCTAGCAGTTATGTAAAGATTCGCGGCTTGGCGTGGCCTGCTTTACTTGTTGGATGGGTTTCTCAAAGTGCAAGTCTTGGCATGAAAGATTCCTTGGGACCCTTGAAGTCCTTGGCTGCTGCTACTGTTATAAATATTATTGGTTGCATAGTTTTGTGCAACTGGTTAGGCTATGGAATTGTAGGGGCAGCGTGGGCTACAATGATTTCCCAAGTTGTTGCTGCTTCCATGATGATTAAAACACTAAACAAAAAGGGATATAACGCACTTGCCTTCTCCATTCCGTCAGGGAAGGAACTTCTGATGATATTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTGCTTATATATTTCGCTACATCATTGGGTACACATACAATGGCTGCTCATCAAGTAATGGTCCAAACATATTCCATGTGTACTGTTTGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAATTGATATATGGAGCTAATCGCAGCTTATCAAAGGCCCAATTGCTCCTAAGGTCTCTTCTGACAATCGGAATCATACTTGGATTATTGCTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCATACATTTTTACACCTGATCGGATGGTCATTCAGGAGATGCATAAAGTGCTGATTCCATACTTTATAGCGCTGTCTATAACTCCCCCTACTCACAGCCTCGAGGGAACATTGCTGGCTGGGCGGGACCTGAGATTTATAAGTTTGTCAATGACTGGATGCTTTTGCGTGGGTTCACTAGTATTATGGGCCATGAGCAATAGATTTGGTTTACTTGGCTGCTGGTTTTCCCTCGCAATATTTCAATGGGCTCGCTTTTCAATTGCCCTCCAGCGCCTTCTTTCTCCCAAGGGCGTTTTGTACTCAGGAAACACACATGAGCTGCGCAAGCTGAGGACTACTTGA 1632 0.44 MAFKLKPLLLPSYLHSSPRQNPNFTLSNHRLPRFFSAHSLPFGLSLSNTASASTYHRNAFVTARAFRSDEIANEGEEEEKEERISTQGEKKELANRGILDQIKEIVMFTGPATGLWICAPLMSLIDTAIIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKQEVQHHISILVFVGLSCGVVMLLFTRLFGAAIITAFTGSKNAHIVPAASSYVKIRGLAWPALLVGWVSQSASLGMKDSLGPLKSLAAATVINIIGCIVLCNWLGYGIVGAAWATMISQVVAASMMIKTLNKKGYNALAFSIPSGKELLMIFGLAAPVFMTMMSKVAFYSLLIYFATSLGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIYGANRSLSKAQLLLRSLLTIGIILGLLLGIVGTSVPWLFPYIFTPDRMVIQEMHKVLIPYFIALSITPPTHSLEGTLLAGRDLRFISLSMTGCFCVGSLVLWAMSNRFGLLGCWFSLAIFQWARFSIALQRLLSPKGVLYSGNTHELRKLRTT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02494 543 Pfam MatE 117 272 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun11g02494 543 CDD MATE_DinF_like 103 524 IPR044644 -
Viun11g02494 543 NCBIfam MATE family efflux transporter 111 504 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Viun11g02494 543 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 71 528 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02494 Viun-Chr11 38408911 38415986 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02494 K03327 - gmx:100778835 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02494 11 38408911 38415986 Viun11g02494 11 38408911 38415986 ECH