Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02492 ATGGTTTCTCTCAATCCAGAAGCACCTGAATTTTTTCCCACTCATACCTTCAAGCTTCAGCAAAAAGAAGAACCTTTTTCATGCCCCAATTTCATCACTTCCACATTCACTCCTCACAGCCACTACTACTATGTTGTTTCTTCATTTCCCTCGCGTGAACTTCACCCCCATTACGTTTATTACCCCGCCACAACTTTTTCACCACCTTCCATATCCACCCCTTTGGCGGCGCCACAATCTGAACCACCCCGTATTCATAGAACAGAAAAAGAACCTGGTCCAGTGGATTCCCATGAAGTGAACCAGAAGAAGGATGAAGTGGTTGTGGCTGAAGATGTAAAGTGCGGCGCAAAAGGGCTGGTGCAGAAGCAAGTGTTTAAAGCTTTCATAAGTTACGGAACAATGAATGATCAACGTTCTGAAGGTACGAGGATGATGAAGGCTTATGTGCCGAGAAGGAAGGGAGAAGAAAAGGGTCAACGCAGAAGCTTTGACTTTTCTAAGAGCGGAAAGGTTACGAGGCACCCAGATGAACAGGATTGTTGGAGGGGTTATACTAAGAAGAAACGTTGTTTTCCTCTGTTGCCTGTTAGGGTGGACAAGAACGAAACCACTGTCATGATCAGAAATATTCCTAGCAAATACACCCGAGATATGCTGGTGGAGTTTCTGGACAGTCACTGCATGAAAGTGAATCTGAGAGACAAAGAGAAAGACGAAGAGTCTTGTTGTTTAGCTTTTGATTTTGTTTATTTGCCAATTGATTTCAAAACTGGGATGAACAAGGGTTATGCTTTTGTGAACTTCACCAAACCCCAGGCAGCATGGAAGTTTCTTTTGACAGCTTCCAACATGAAATGGGACTTGTTCCAGTCCCACAAGATACGTGAAGTTGTTTCTGCACGGTTGCAGGGGAAGGAGAGGTTGGAGAAGCACTTTGAAACTATGAACTTTCCAAGCGAGTCCGAGGATGTTCTGCCAGTGTGTTTTAACCCGCCACGCGATGGAGTTATAAAGGGAAAGCAAATAACATGTGGGAAGCTGCGGAAGCATGAACAATTCGTTGCTGCGAAAGTTAAAATTCTTGGTGTTAGTTTTTGTGATATCTCATGTTTGGGGTTTAGTCAGCGCCTGGAGACATGTATGAAGTCAAAGGACACAACAAACGTTGTCTTGTCTGGGGTCAGTGTTAAGTTCTGCATGGTTGATTTGCTTTTGAGATTGTGCTCGCTGGGTCAAAAGATTTTAACCCGTTTTGAAGCAATTAGAATTGATGGGTCTGTCAAGAGAGGTGTTTTGTGCTCTTTTGAAGTGGTTAAAAATGGTGAAGATTGGGGGGTTTAA 1344 0.4368 MVSLNPEAPEFFPTHTFKLQQKEEPFSCPNFITSTFTPHSHYYYVVSSFPSRELHPHYVYYPATTFSPPSISTPLAAPQSEPPRIHRTEKEPGPVDSHEVNQKKDEVVVAEDVKCGAKGLVQKQVFKAFISYGTMNDQRSEGTRMMKAYVPRRKGEEKGQRRSFDFSKSGKVTRHPDEQDCWRGYTKKKRCFPLLPVRVDKNETTVMIRNIPSKYTRDMLVEFLDSHCMKVNLRDKEKDEESCCLAFDFVYLPIDFKTGMNKGYAFVNFTKPQAAWKFLLTASNMKWDLFQSHKIREVVSARLQGKERLEKHFETMNFPSESEDVLPVCFNPPRDGVIKGKQITCGKLRKHEQFVAAKVKILGVSFCDISCLGFSQRLETCMKSKDTTNVVLSGVSVKFCMVDLLLRLCSLGQKILTRFEAIRIDGSVKRGVLCSFEVVKNGEDWGV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02492 447 MobiDBLite consensus disorder prediction 152 171 - -
Viun11g02492 447 MobiDBLite consensus disorder prediction 83 99 - -
Viun11g02492 447 Gene3D - 132 308 IPR012677 -
Viun11g02492 447 SUPERFAMILY RNA-binding domain, RBD 198 287 IPR035979 GO:0003676
Viun11g02492 447 MobiDBLite consensus disorder prediction 71 99 - -
Viun11g02492 447 Pfam RNA recognition motif 2 204 313 IPR007201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02492 Viun-Chr11 38403408 38405701 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02492 - - vun:114170421 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02492 11 38403408 38405701 Viun11g02492 11 38403408 38405701 ECH