Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02477 ATGGTTCAAAGAATAGTTCTAGGAAACTCGAAGCCATCTTTCTCTCAGCACCAAGATGGCAAAACCAGAAAAACTGATACGATGAAGAAAATGATGATGTCAAGGTCCTTTCAGCTTTCTGATTTTGAGCTTTCTCGTTCATCGTCTTTATCTCAACCGAGAAAGTCACCAAATTACATGAAGCCTACCAGCAGTTCGGAAGCAAAGAAAGAGCTTTTCTCTGTTAGTCATCGGCATAAACAATCTAGTTCAGATGGTAAGAGTCTACCACAAAAGGGTATGAGAAATTCAAAAGCTAGTTTCGTTTCTTGCAAAGAACATGCAAAATCTTTGTCTAGATCGTGTAGTTTGAATTCGGTGAGAACATTAACGAAGAGTCATAGCTTTAAGCCTTGCAAAGCTTGTTCAAAAAAATTCACATCAGAAGTTATGTTCGAAGACGTGAATGCACCAGAGAGGGCTACGTGTTCTTCAACTTTGAAAGAGTATAACTTCCCCGAGTTCCTCACGCTTCACCCCGGAGGAACTGAGTCTGAGGGAGTTTCGGTCATGAAGGTTTGCCCTTATACATACTGTTCTCTTAATGGCCATGGTCATGCTCCTTTGCCTCCATTGAAGAGCTTCGTGTCAGCAAGAAGGCATCTTTTGGAGACCCAGAAGAAGAACACGAACCTGGAACTTGTGATCCCTCAAAGATGTGATATTGAGCAGATTTTCTTTAATGAAAAGCCTCAATTTGATGAAGCTGCTATAGGTAATCCAACAATCTCGCCCTTGGCACAAGAAATTGGTATGGATTTCCTTTTTGAAATCTATGCCAAGGAAAGGGAAGGAGCTGAAGAAGTGAGAAAATTCAACACCGTCAAAGAGATTGAAAAACCAGAAGATATCAATTTTGCAAAGGATGAGAATCGCATTGCAGCAGAAGAGGATGGTGTCAAGCAAGTTACTCAAGGTGTGACTCTTGATCTCCTAAAGTCTCAGAAAGGGGATTTCAGAAACTACTTCACTGTTGCTGCAGCTGAAGTAGATAACAAATGGAGCTTTCATCTAGGAGAAGATGTTGAAGATGCAGAGGAAAATCATCCAACTAGCTTGTTTCATGAAGAAACCTGTACAGAAAGCTACTGCAATGTTGAGTTGGATGAGTACTATTCTCCATGCTGGGAGGAACAACATTTCCGTGAATTCATCTATGAAGACACTACTGATTCTTCTATCTTCTCAGTGGAGGAGATCAACTCAAAACTCGAATCGCTATCAGAGAGATCGCGTGATAAATCTGAAATGTTGTTAGATGACATCTTTAACAGCAATTATGCAGACATTAATGTTGAAGATGTCAGACTCCAAGAAGACAAAGAAGAGAGGACAATATGTTTTGAAGCACAACCTCATTGCACTGATTTTGTTCTTGAAGACACAAGTGAAAGCATCGAGTTTCTCATTCAAGAAAAATATTATCCATCCAAAGATATAGATTCCGAGTATGAGGAATCTACTTTGAGCAAGGGAGTATTTCAGACTCTAACTAATGAACAGGATAACAACGGAGAAAATGAGAAACATGTGGATTACGAGGTTAGTTGTGTCTCAATGTTACTTGATGAAGAGATTGTTGAAAATAGTGAATGCCACAGCAGTAGTGAAAGCTGCAAGATTGATGAGAGCTATGAAGATAAAGATGCAAGCCTAGAGAATGATGATGATGATGATGATGATGATGATGATGATGAATTTAACCGGGAGCACATAATTCACATGTCTAAAGTGCTTGAAGAAAGCACCACCATTATTATTCAGGAGCAAAAATTTTCAGAGGAAAATGAAGTTAAAAGTAGTAACTTGAAGAGCACAGGAGGTGAAGAGAAGCACGCAAACAAAAATTGGCAATGGGGAACTAAGCGCAAGAGAGCTGTAGAAGAGGAAGAGGAAATGAGAAAGATAAACCCACGAAAGCCAAATTTTCTGCCATTAGTTTCTGAGCTAGAACCAGAGAAGGTTGATCTGAAGCACCAAATGATAAATGAAAGGAAAAATGCAGAGGACTGGATGCTTGATTTCGCACTGAGACGAGTTGTCACAAAACTTGCTCCAGCTGGGAAAAGGAAAGTGTCATTGCTGGTTGAAGCTTTTGAAGCAGTAATGTCAATGCCCAAAGGCGAAGCTCGTATAAGAAATGATTCACCCTTTGTTCATGCAAGACCTATTCAAGCTTGTAGCTGA 2226 0.3989 MVQRIVLGNSKPSFSQHQDGKTRKTDTMKKMMMSRSFQLSDFELSRSSSLSQPRKSPNYMKPTSSSEAKKELFSVSHRHKQSSSDGKSLPQKGMRNSKASFVSCKEHAKSLSRSCSLNSVRTLTKSHSFKPCKACSKKFTSEVMFEDVNAPERATCSSTLKEYNFPEFLTLHPGGTESEGVSVMKVCPYTYCSLNGHGHAPLPPLKSFVSARRHLLETQKKNTNLELVIPQRCDIEQIFFNEKPQFDEAAIGNPTISPLAQEIGMDFLFEIYAKEREGAEEVRKFNTVKEIEKPEDINFAKDENRIAAEEDGVKQVTQGVTLDLLKSQKGDFRNYFTVAAAEVDNKWSFHLGEDVEDAEENHPTSLFHEETCTESYCNVELDEYYSPCWEEQHFREFIYEDTTDSSIFSVEEINSKLESLSERSRDKSEMLLDDIFNSNYADINVEDVRLQEDKEERTICFEAQPHCTDFVLEDTSESIEFLIQEKYYPSKDIDSEYEESTLSKGVFQTLTNEQDNNGENEKHVDYEVSCVSMLLDEEIVENSECHSSSESCKIDESYEDKDASLENDDDDDDDDDDDEFNREHIIHMSKVLEESTTIIIQEQKFSEENEVKSSNLKSTGGEEKHANKNWQWGTKRKRAVEEEEEMRKINPRKPNFLPLVSELEPEKVDLKHQMINERKNAEDWMLDFALRRVVTKLAPAGKRKVSLLVEAFEAVMSMPKGEARIRNDSPFVHARPIQACS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02477 741 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 168 175 IPR018506 GO:0020037
Viun11g02477 741 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 11 717 IPR044681 GO:0005516
Viun11g02477 741 MobiDBLite consensus disorder prediction 1 27 - -
Viun11g02477 741 MobiDBLite consensus disorder prediction 545 579 - -
Viun11g02477 741 MobiDBLite consensus disorder prediction 43 70 - -
Viun11g02477 741 MobiDBLite consensus disorder prediction 545 560 - -
Viun11g02477 741 Coils Coil 410 430 - -
Viun11g02477 741 Pfam Plant calmodulin-binding domain 623 717 IPR012417 GO:0005516
Viun11g02477 741 MobiDBLite consensus disorder prediction 43 96 - -
Viun11g02477 741 MobiDBLite consensus disorder prediction 561 579 - -
Viun11g02477 741 MobiDBLite consensus disorder prediction 71 85 - -
Viun11g02477 741 MobiDBLite consensus disorder prediction 1 16 - -
Viun11g02477 741 SMART CaM_binding_2 608 717 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02477 Viun-Chr11 38297338 38300243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02477 622 741 Calmodulin-binding Proteins AT2G38800 50.833 6.00e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02477 - - gmx:102670203 936.021