Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02464 ATGACTTCGAGATCGCGCCACGTGTCCCTCCTCATGGACGGAAACGACGAGATCACGGACTCCTTCAACGGCGTGCCGTTCCGGTGGAGGCTGGTGTCCCGACTTGGCAAATCGAATTACGCGGTGCACTTCTTCGAGGTGCGGTTCCACAAGAAGCACCGGGAGATGGTTCTGGCGGAGTATTTTCCGCGCGTGATGAAGGAGGCGGATGCGGCGCGTGAGCGGAGGAAGACGCTGAGGCTGTTCACGGTGAAGGACATGCGGTTTCGGATGGGAGGGAGGGGGGAGTCGTGGCAGGGCGTGAATCTTGAGCACCCTGCGACGTTTGCGACTGTGGCGATGGATTGGGAATTGAAGGAGATGATAATTAGGGATTTGGATAGGTTTGTGGAGAGAAAGGGTTTATATAAGAGTGTTGGGAAGGCGTGGAAGAGAGGGTACTTGCTTTCGGGTCCCCCTGGGACCGGGAAATCGAGTTTGATTGCTGCTATGGCTAATTATCTGAATTTCGATGTCTATGACTTGGAACTCGCTGCTGTTAATGGAAATTCTGACCTTAGGAGATTGTTGATTGCCACCGGGAATCGTTCCATTCTTGTTGTGGAGGACATTGATTGCTCCCTTCATTTGCAGGATAGGCTTGCAAAACCTAAACCTAAATCATCACAACCCCACCACTTCATCCCGCACCATTTTTCAGCACCCCAGGTGACATTGTCGGGGTTCTTGAATTTCATAGATGGGTTGTGGTCGAGTTGTGGGAATGAGAGGATCGTAGTGTTCACGACGAATCATAAGGAGAAATTGGACCCTGCTCTCTTGCGTCCTGGGCGTATGGATGTGCACATTGACATGACTTACTGCACCCCAGGTGGGTTCAAAATGCTGGCTTCCAATTACCTTGGGATCACGGAGCACCCACTTTTTGTTCAAATTGAGAACTTGCTTGGGGTGATCGATGTCACTCCTGCGGAGGTAGGGGAGCAGTTTTTGCTGGATGAAGACCCGGATATTGCACTCAACAGCCTCATGGAGCTCCTTCTTGAGAAGAAACGAAATCATGAATTGAAGATGAAAGCACCTCTCACCTTTCAATGA 1098 0.51 MTSRSRHVSLLMDGNDEITDSFNGVPFRWRLVSRLGKSNYAVHFFEVRFHKKHREMVLAEYFPRVMKEADAARERRKTLRLFTVKDMRFRMGGRGESWQGVNLEHPATFATVAMDWELKEMIIRDLDRFVERKGLYKSVGKAWKRGYLLSGPPGTGKSSLIAAMANYLNFDVYDLELAAVNGNSDLRRLLIATGNRSILVVEDIDCSLHLQDRLAKPKPKSSQPHHFIPHHFSAPQVTLSGFLNFIDGLWSSCGNERIVVFTTNHKEKLDPALLRPGRMDVHIDMTYCTPGGFKMLASNYLGITEHPLFVQIENLLGVIDVTPAEVGEQFLLDEDPDIALNSLMELLLEKKRNHELKMKAPLTFQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02464 365 Gene3D - 99 283 IPR027417 -
Viun11g02464 365 CDD RecA-like_BCS1 122 285 - -
Viun11g02464 365 ProSitePatterns AAA-protein family signature. 257 275 IPR003960 GO:0005524|GO:0016887
Viun11g02464 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 326 IPR027417 -
Viun11g02464 365 PANTHER BCS1 AAA-TYPE ATPASE 4 353 - -
Viun11g02464 365 Pfam ATPase family associated with various cellular activities (AAA) 148 285 IPR003959 GO:0005524|GO:0016887
Viun11g02464 365 Gene3D - 284 353 - -
Viun11g02464 365 SMART AAA_5 143 289 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02464 Viun-Chr11 38183219 38184605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02464 108 327 Miscellaneous Gene Families AT5G58870 29.386 1.59e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02464 K08900 - gmx:100789716 528.865