Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02449 ATGGAAGGAACTGGAGGCAGCAGTGCCTCGGCTGCTGCACCCGTGAACCAAAAGTGGCAGGAATTAGCGAAGCTATTTCAATATTATCTGGATAAATCTACGCCACACGCCACGTATAGATGGATTGGGACTTTGGTTATTGTGTCGATCTTTGTTTTGCGGGTTTTTTATGTCCAGGGATTTTACATCGTGTCTTATGGATTGGGAATCTACCTGCTGAATCTGTTGATTGGGTTTCTGTCACCGTTGGTCGATCCTGAGCTGGAGCCTTCTGATGGGCCTTTGCTGCCGACTAAAGGTTCTGACGAGTTCAAACCGTTCATTCGCCGACTGCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCATTTATGATGACTTTTTTTTCTGTGTTTGATGTTCCTGTGTTCTGGCCAATATTACTCTGTTACTGGGTTGTTCTGTTTGTCCTTACTATGAGGCGCCAAATTGCACACATGATCAAATACAAATACATACCATTCAACATTGGAAAGCAGAAGTATACTGGCAAAAGATCCTCTCCAAGTAGCAGTGGCAGTCGTGCAGACTGA 585 0.4427 MEGTGGSSASAAAPVNQKWQELAKLFQYYLDKSTPHATYRWIGTLVIVSIFVLRVFYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFMMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKYKYIPFNIGKQKYTGKRSSPSSSGSRAD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02449 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016020
Viun11g02449 194 PANTHER PROTEIN RER1 7 185 IPR004932 GO:0016020
Viun11g02449 194 Pfam Rer1 family 19 180 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02449 Viun-Chr11 38123358 38126310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02449 1 194 Miscellaneous Gene Families AT2G21600 78.462 1.78e-113 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02449 - - mnt:21401534 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02449 11 38123358 38126310 Viun11g02449 11 38123358 38126310 ECH