Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02447 ATGGGGAAAGCGAAGGGGAAGCACCGTTTGGATAAGTACTATCACTTGGCAAAAGAGCATGGTTACAGGTCTCGAGCTTCATGGAAGCTGGTTCAGCTCAATTCCAAATACCAATTCCTCGAGTCCGCACGCGCCGTCCTCGACCTCTGCGCCGCCCCCGGAGGATGGATGCAGGTGGCGGTGCAGCGCGTCCCCGTGGACCACCTCGTCATCGGCGTGGACCTGGCGCCCATCGCCCCCATCCGCGGTGCTATCGCCATCCAAGAAGACATCACGAAAACAGAATGCAAGTCCCGCATCAAGAAGCTCATGAACCAGCACGGATGCCGCGCTTTTGACGTCATTCTGCACGACGGCTCTCCTAATGTCGGCGGAGCCTGGGCTCAGGAAGCCATGAGCCAGAACGCTCTCGTCATTGATGCCGTCAGATTAGCCACTCAGTTCTTAGCGCCCAAGGGTATCTTTGTCACCAAAATTTTCAGGTCGCAAGATTATAGCTCTGTGGTGTATTGCTTGAAGCAGTTGTTTGAGAAGGTTGAGGTGGATAAACCTGCGGCTAGTCGATCTGAATCTGCTGAGATATATGTTTTGGGGCTTAGGTACAAGGCTCCTGCCAAGATTGATCCTCGACTTCTTGATGTGAAGCATCTCTTTCAGGGGTCTGTGGAACCGCAGCCTAAGGTGGTGGATGTACTTAGAGATACTAAGCAGAAAAGGCATCGTGACGGCTATGAAGATGGAAACACAACTTTAAGGAAGATATCTTCAGCTTCAAATTTCATTTGGTCAGATTCTCCTCTGGAGATCCTTGGTTCAGTCACTTCTATATCCTTTACTGATGCAGATGATTTACCAATCAAGGACCATGATCTAACCACTGAGGAGGTCAAATCTCTATGCGATGATTTAAGGGTTTTGGGGAAGCAAGATTTCAAGCATCTTCTAAAGTGGAGGATTAACATTAGAAAAGCTCTTTCACCAACTCAGAAGCATGATCCTCCTACCACTAAAGAGCAGGCGGAAAATGAGCCGAAGGTGGATGAAGAAGATAGATTACTCAATGAAATGGAGGAACTGACTAATGTGATGGACCGCAAGAAGAAACGTGCAAAGAAGCTTCTTGCTAAAAGAAGAGCCAAGGACAAGTCACGGAAAGCAACAGGGATGCAAATGGATGCTGTAGAGGATGGTTATGTAGATCAGGAGTTGTTTTCCCTTTCCTCTATAAAGGGTAAGAAAGATCTGGTAGCTGTTGACAACACTGAGTATGAAGGTGATGAGGGTGAAGTAGAAGATAGTGAGAATGAAGAAATGCATGAAGGCCCAGAGCGTTCATCCAGTGACTTGGAAGATTCTGATGAGGAACGTAAAAGATACAATGAACAAATGGAAGATTTGATGGATAAAGCTTATGAGAAGTTTGTCATCAGAAAGGAAGGAAGTACAAAGCAGCGTAAGCGAATTAAAAAATCCTATGATGCAGAGGCCCAACTTTTGGAGGGCGGTGAGGATGATGATATTGTTGAAGCCAAGTATGATTCGGATGAAGAGCAGGGTGATCAAGAAGCAAATCCATTGATGGTGCCACTTAATGACGGGGCAGAACCGACCCAAGAGGAGATCATGAAAAAGTGGTTTAGTCAGGATATATTTGCCGAAGCTGCAGAGGAAGGTGACTTTGAGAAGGATGAGAGTAAAGATGAAATGGATATAGATGATGAGCCTAAGGAGAAGACATCCGTTGCCAAAAAGGTCAAAGAAAATAAAACAGCAGCTCCAGCAGTGGTAGATCACCCTCAACCTCAAGCATCCAAGACAGCAGATGATTTCGAAATAGTTCCTGCGCCCGGCTCTGATTCAAGTGATGATTCATCCTCAGATGAATCGGAGGAAGACGTTGAAACCAAAGCTGAGATACTGGCTTATGCAAAGAAGATGATGAGGAAAAAGCAACGGGAGCAGATATTGGATGATGCATATAACAAGTACATGTTTGATGACGAGGGGTTGCCCAAGTGGTTTCTAGATGAAGAGAAGAAACACCGGCAACCAATAAAGCCTATTTCGAAAGAGGAAGTTGCTGCAATGAAAGCGCAATTTAAAGAAATTGATGCCCGGCCTGCAAAGAAGGTGGCGGAGGCCAAAGCACGGAAGAAGCGTGTTGCAATGAAGAAGCTTGAGAAGGTGCGGAAGAAGGCTAATGCCATATCGGATCAGACAGAGATATCTGATCGTTCCAAGAGGAAGCAAATTGAGCAACTCTATAAAAAGGCTGTTCCGAAGAGGCCTAAAAAGGAATATGTAGTTGCAAAGAAAGGTGTACAAGTGAAAACTGGTAAAGGAAAGGTACTTGTTGATCGAAGAATGAAGAAGGATGCTAGGAAACGTGGAATGGGTAAGGGAGGAAAAGGAGGTTCCAAGGGGAAGGGCAAGGCTTCAAAGGGCAAAGGAGCTTCGAAGGCCTCCTCTGCCAAAAAGGGTAAACAGAGGACTAATTGA 2499 0.4614 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKYQFLESARAVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAIAIQEDITKTECKSRIKKLMNQHGCRAFDVILHDGSPNVGGAWAQEAMSQNALVIDAVRLATQFLAPKGIFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLRYKAPAKIDPRLLDVKHLFQGSVEPQPKVVDVLRDTKQKRHRDGYEDGNTTLRKISSASNFIWSDSPLEILGSVTSISFTDADDLPIKDHDLTTEEVKSLCDDLRVLGKQDFKHLLKWRINIRKALSPTQKHDPPTTKEQAENEPKVDEEDRLLNEMEELTNVMDRKKKRAKKLLAKRRAKDKSRKATGMQMDAVEDGYVDQELFSLSSIKGKKDLVAVDNTEYEGDEGEVEDSENEEMHEGPERSSSDLEDSDEERKRYNEQMEDLMDKAYEKFVIRKEGSTKQRKRIKKSYDAEAQLLEGGEDDDIVEAKYDSDEEQGDQEANPLMVPLNDGAEPTQEEIMKKWFSQDIFAEAAEEGDFEKDESKDEMDIDDEPKEKTSVAKKVKENKTAAPAVVDHPQPQASKTADDFEIVPAPGSDSSDDSSSDESEEDVETKAEILAYAKKMMRKKQREQILDDAYNKYMFDDEGLPKWFLDEEKKHRQPIKPISKEEVAAMKAQFKEIDARPAKKVAEAKARKKRVAMKKLEKVRKKANAISDQTEISDRSKRKQIEQLYKKAVPKRPKKEYVVAKKGVQVKTGKGKVLVDRRMKKDARKRGMGKGGKGGSKGKGKASKGKGASKASSAKKGKQRTN 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02447 832 MobiDBLite consensus disorder prediction 421 436 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 552 635 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 793 814 - -
Viun11g02447 832 Pfam Domain of unknown function (DUF3381) 235 384 IPR024576 -
Viun11g02447 832 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 803 IPR028589 GO:0008649|GO:0031167
Viun11g02447 832 MobiDBLite consensus disorder prediction 480 533 - -
Viun11g02447 832 Gene3D Vaccinia Virus protein VP39 19 208 IPR029063 -
Viun11g02447 832 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 202 IPR015507 GO:0001510|GO:0008168
Viun11g02447 832 MobiDBLite consensus disorder prediction 334 348 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 498 520 - -
Viun11g02447 832 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 202 IPR029063 -
Viun11g02447 832 MobiDBLite consensus disorder prediction 418 464 - -
Viun11g02447 832 Pfam FtsJ-like methyltransferase 22 200 IPR002877 GO:0008168|GO:0032259
Viun11g02447 832 Coils Coil 709 729 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 775 832 - -
Viun11g02447 832 Coils Coil 349 376 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 480 497 - -
Viun11g02447 832 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 339 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 437 464 - -
Viun11g02447 832 Coils Coil 449 469 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 366 383 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 554 568 - -
Viun11g02447 832 Pfam Spb1 C-terminal domain 605 796 IPR012920 GO:0005634|GO:0006364|GO:0008168
Viun11g02447 832 MobiDBLite consensus disorder prediction 569 585 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 325 348 - -
Viun11g02447 832 MobiDBLite consensus disorder prediction 365 388 - -
Viun11g02447 832 FunFam AdoMet-dependent rRNA methyltransferase SPB1 19 208 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02447 K14857 - gmx:100790741 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02447 11 38111527 38116597 Viun11g02447 11 38111527 38116597 ECH