Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02404 ATGATTGGGCGCAGAGACAGAGAGGGACCCTTGATGAGGAACATCAACCCAAATTCTCTACGCAAATCCAGGGTCCTAACCGCAGTTGCAATTGGCGTCTTCATTGGATGCGTCTTCGCTTTCTTGTACCCCAATGGCTTCTTCGTTTCTGACTCTGTCGCTGCTAATCGCCGCCTCTCTAACGCGGGATCCATAACCCAGGAAAATTCAGCTGGATGTGAATCCTCAGATCGGGTCAACCTGTTGAAATCAGAGTTTGTAGCGGTATCAGAGAAGAATGCTGAGCTAAAAAAACAGGTGAGGGAATTGACTGAAAGGCTTCGGCTTGCAGAGCAAGGGAAAGACCAGGCTCAAAAGCAGTTCCTTACGCTAGGTAAACAGGTTAAGCCTGGACCCTTTGGTACTGTAAAGGGATTGAGAACCAACCCTACCGTTGTTCCTGATGAGTCTGTGAACCCGAGATTGGGAAAGATATTAGAGAAAGTTGCAGTTAAACGAGAGCTTATAGTTGGACTTGCAAACGCCAATGTAAAGGAGATGCTGGAGGTCTGGTTCACCAACATCAAGAGAGTTGGCATAACCAACTATCTAGTTGTTGCTTTAGACGATGAGATTGTAAAGTTTTGTGAATCAAATCAAGTGCCGGTGTATAAAAGAGATCCAGATGATGGTGTTGATGTAATTGGAAGAGTCGGGGGTAACCATGCTGTCTCTGGTCTTAAATTTCGTATTCTAAGAGAGTTTTTGCAGTTGGGATACAGTGTTCTTCTATCAGATGTCGACATTGTATATTTGCAGAATCCATTTGATCATCTATACCGGGATTCAGACGTGGAGTCCATGAGTGATGGTCACAATAACATGACAGCATACGGCTACAACGATGTGTTTGATGAACCTGCAATGGGTTGGGCTAGATATGCTCATACTATGAGGATATGGGTTTACAACTCTGGTTTCTTCTATATCAGACCAACAATCCCTTCAATTGAGCTTTTGGATCGCGTGGCGACACGGCTTTCGAAAGAGAAGGCTTGGGACCAAGCTGTTTTCAATGAGGAACTGTTTTACCCCTCACATCCTGGTTATGATGGCCTTCATGCTTCCAGAAGAACTATGGATATGTATCTCTTCATGAATAGCAAGGTTCTGTTCAAGACAGTGAGAAATGATGGTAACCTCAGCAAATTGAAGCCTGTAATTATTCATGTGAATTATCACCCTGATAAGCTTCCCCGAATGAAAGCAGTTGTTCAGTACTACGTTGATGGGAAGCAGGATGCTCTCAAACCTTTCCCTGATGGCTCAAATTGGTAA 1317 0.4419 MIGRRDREGPLMRNINPNSLRKSRVLTAVAIGVFIGCVFAFLYPNGFFVSDSVAANRRLSNAGSITQENSAGCESSDRVNLLKSEFVAVSEKNAELKKQVRELTERLRLAEQGKDQAQKQFLTLGKQVKPGPFGTVKGLRTNPTVVPDESVNPRLGKILEKVAVKRELIVGLANANVKEMLEVWFTNIKRVGITNYLVVALDDEIVKFCESNQVPVYKRDPDDGVDVIGRVGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNMTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSKEKAWDQAVFNEELFYPSHPGYDGLHASRRTMDMYLFMNSKVLFKTVRNDGNLSKLKPVIIHVNYHPDKLPRMKAVVQYYVDGKQDALKPFPDGSNW 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02404 438 PANTHER ARABINOSYLTRANSFERASE RRA3 1 437 IPR044290 GO:0016757|GO:0080147
Viun11g02404 438 SUPERFAMILY Nucleotide-diphospho-sugar transferases 169 367 IPR029044 -
Viun11g02404 438 Pfam Nucleotide-diphospho-sugar transferase 193 411 IPR005069 -
Viun11g02404 438 Coils Coil 79 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02404 Viun-Chr11 37852602 37855301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02404 K20783 - gmx:100804189 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02404 11 37852602 37855301 Viun11g02404 11 37852602 37855301 ECH