Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02400 ATGGAGGCATGCAAGAAGACGAAGGTTTTGATGGTGGTGATGATGGTGTTGGGCACTGTGATGATGGAAGCGAATGCGCAATATTACTCGTTCTGTGGCATGCCGAAAGATGGGTTGAAAGCATGCTTGGGAAGTGTGAGTGGGGAGAACCCTGGTGATCCAACCTCTGATTGCTGCTCAGCCATCGGAAAAGCTGATCTTAAGTGCTTCTGCCGCTACAAGGATTCGGGGTTGCTCTCTATCTATGGTGTTGATCCCAACAAATGCATGCAACTCCCTGTTAAGTGCAAGCTTGTCGACTCCTTCCACTGTTAG 315 0.4921 MEACKKTKVLMVVMMVLGTVMMEANAQYYSFCGMPKDGLKACLGSVSGENPGDPTSDCCSAIGKADLKCFCRYKDSGLLSIYGVDPNKCMQLPVKCKLVDSFHC 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02400 104 CDD nsLTP_like 32 104 IPR044741 -
Viun11g02400 104 Pfam Probable lipid transfer 13 103 IPR016140 -
Viun11g02400 104 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 102 IPR036312 -
Viun11g02400 104 Gene3D - 29 104 IPR036312 -
Viun11g02400 104 PANTHER LIPID BINDING PROTEIN-RELATED 10 100 IPR039265 GO:0005504|GO:0009627
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02400 6 104 Acyl Lipid Metabolism Gene Families AT5G48490 37.374 1.57e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02400 - - gmx:100305636 158.303