Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02395 ATGCTCAGAAGAAAGACTTTGCAGATTCTCTCTAGTTTGCCACTGGCTATTGCGGACATGTTTGCTGCTGCTGCTTTGATGGCTTTGGGAACATTTATTGAACAAGGTGAAGCTCCTGACTTTTATATCCAGAAATACCCTGAAGATAATCCTGTGTTTGGATTTTTTACTTGGAGATGGATTCTCGCCCTTGGTTTTGATCACATGTTTTCGTCCCCTGTATTTCTTGGAGTGTTGGCTCTCCTGGGTGCATCACTCATGGCCTGCACATACACAACTCAACTCCCTCTCATCACGGTTTCTAGAAGATGGTCATTTTTGCATTCTGCTGAGGCTATACGCAAGCAAGAATTTTCAGAATCATTGCCAAGAGCATCAATCCAAGATGTTGGTACTATTTTGATGGGAGCTGGATACGAGGTATTCTTGAAAGGACCATCTTTATATGCCTTTAAAGGACTTGCAGGTCGATTGGCCCCTGTTGGAGTTCATATAGCACTGTTACTTGTAATGGCTGGAGGAACTGTTAGTGCTGCTGGGAGCTTCAGAGGTTCGGTCACTGTGCCCCAGGGGCTGAATTTTGTTGTTGGTGATGTTCTGGTTCCTTCTGGCTTTCTCTCCTCTCCAACTGAGGCTTTTAATACAGAGATTCATGTCAACAGATTCTACATGGATTATTATGAGAGTGGAGAGGTTTCACAGTTCTACACTGATCTTTCCCTTCGTAACATGGATGGGAAAGAAGTAATGAGGAAGACAATCAGTGTAAATGACCCTTTAAGATACGGTGGTATCACCATATATCAGACAGATTGGAGTATTTCGGCTCTGCAAATTCTTAAGGATAATGAAGGACCGTATAACTTGGCTATGGCACCTTTACAGATCAATGGAGATAAGAAACTTTATGGTACTTTTCTACCGGTTGGAGATATTAACTCTCCTGACGTTAAGGGAATATCCATGCTTGCTCGTGATCTACAGTCAATTGTCCTTTATGATAAAGAAGGAAAATTTGTGGGAGTTAGACGCCCTAATTCAAAGCTCCCAATCAATATTGATGGCTCAGAAATTCTCATTGTTGATGCAATAGGAAGTAGTGGCTTGGACTTGAAGACTGACCCTGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTAATGATCACTACTTGCATCAGCTATTTATCTCATTCACAGATATGGGCTTTACAAGATGGAACAACAGTCTTCATTGGAGGAAAGACTAACAGAGCAAAGATGGAGTTTCCGGAGGAGATGAACCTCTTACTTGATAAAGTCCCTGAAATTGTTGAATCAACTCTGCCTAAGCAAGCTGATAGCATTAGTGGTTAG 1356 0.4211 MLRRKTLQILSSLPLAIADMFAAAALMALGTFIEQGEAPDFYIQKYPEDNPVFGFFTWRWILALGFDHMFSSPVFLGVLALLGASLMACTYTTQLPLITVSRRWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPSLYAFKGLAGRLAPVGVHIALLLVMAGGTVSAAGSFRGSVTVPQGLNFVVGDVLVPSGFLSSPTEAFNTEIHVNRFYMDYYESGEVSQFYTDLSLRNMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLYGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFVGVRRPNSKLPINIDGSEILIVDAIGSSGLDLKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFIGGKTNRAKMEFPEEMNLLLDKVPEIVESTLPKQADSISG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02395 451 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 2 440 IPR023494 -
Viun11g02395 451 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 3 432 IPR023494 -
Viun11g02395 451 Pfam ResB-like family 315 427 IPR007816 -
Viun11g02395 451 Pfam ResB-like family 15 279 IPR007816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02395 Viun-Chr11 37795216 37800338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02395 1 439 Miscellaneous Gene Families AT1G49380 76.765 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02395 K07399 - gmx:100807003 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02395 11 37795216 37800338 Viun11g02395 11 37795216 37800338 ECH