Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02361 ATGACAAATGCACATGGCGGCTCCATGTTAGTGGAGCTAAATGCACACAATGCCTTGCATAAACCCAAATTCGAAACGTTATCGCATTATGAACCCCCATTTATTACTTTCAACAATGAGGACGATGATTTCAACCTTGACCATAATCACAATTACGACGATAGCAACAACAATAATGCCTCTCCATACAACATGTCCCCATGGAACTACCATCCCAACACCTCTTCTCCGATCAAAAGGTCTCCTTGGTCATTACCCAACTCAACTGCAAACCACCACAACGAAGATTACCCCCCTGAAACAGAGCTCATTGGATCCCTCGTTCGTGAAACAGGACACATATATTCTTTAGCTGTTTCTGGAGAATTGTTATATGCAGGCTCCGATAGTAAGAACATAAGAGTTTGGAAGCATCTAAAGGATTTCACCGGTTTCAAATCAAACAGTGGTTTGGTCAAAACCATAGTAATCTCTGATGGCAAAATTTTCACTGGCCATCAAGACGGGAAGATAAGAGTATGGAAAGTTTCATCCAAGAATCCATATAACTACAAACGTATAGGGAGCTTGCCCACGTTTAAAGAATACGTGAAATGCTCTATGAACCCAAAGAACTACGTTGAGGTTCGACGAAACAAAAATGCAGTGAAGGTGAAACACTTTGACGCCATTTCGAGTCTAAGCTTAAACAAGGAAGAGGGGGTGTTATACTCTGGATCGTGGGACAAGACGCTCAAAGTGTGGCGCTTGGCGGATTCAAAATGTTTAGATTCTATCAGTGCACATGATGATGCAGTGAATGCAGTGGTATCGCTGCTTGAAGGAAGCGTATTAACAGGGTCTGCGGATGGGACAGTGAAGTTATGGAGGAGAGTGAATGTGCAAAAGGGGGAGAAAGAGAAGAAGTCAAAACATGTGTTGGACCGGATTTTGCTAAAGCAAGAAAATGCTGTTACAGCGTTGGCAGTGAATTGCATGGCCACAATAGTTTATTGTGGTTCTTCAGATGGGTTAGTGAACTTTTGGAAATGTGACCATAAAGGTGAGTACTTGCAAGGTGATGTCTTAAGGGGTCACAAACTTGCCGTGCTTTGCCTTGCCACAGCTGGGACCCTCATATTCAGTGGCTCAGTGGATAACAATATATGTGTGTGGAGGCACAATGAAAATGGGTTTCACACATGTCATTCAGTTTTGATAGGTCATACAGGACCTGTTAAGTGCATTGCTGTGGAGCAGCAACATCCACAATCAGAAAGGGAACAAGGGTGGATTGTGTATACCGGGAGCATGGACAACTCAGTAAAGGTGTGGCATGTGTCTGAACATGTGTCAGAGGTGGGCACAATCCAATGCAAGACCACTTTGAATCATTTTGATTCTTCGTGTTCCTCACCAAGAACAATGAGTGTTAATTCTTCCATATCAGAAACATATTATTCCTCCCCACGAAAGTCTATTATAAGCCATGAAAACGACTTTGATAACCGTAATAGTGATGCTACTATCAGCACTTTGAGTGACAACAATAAGATTTGTGATAAAGAAGAGAAATATTACATTTCGGGTGACACTCATGACAACATAGATGATAATAGCATGAGAGTCATTGATTATGGGAGGAACAAACAAAGTAGCAGTGATGTTGCTAAAAATAATCATTCTACAAATAATAAGATTAATACTAAAAGTATTAAGAATGACCTTAAAAATGTTGATGATAGTAAGAATGACATCAATGACATTAAAAGGGTAAGTGAAAACATTGACATTATCGGCAACAACAATGTTGATATTGGCATACACATTATGAATGACAACAAAAATCACCGCACTCATGGTCTTAAAAGTAACAACAATGGTGACAACACAGATGTAAGCAAAAAGATTGACATTAGCAACAACAATAACAATGTCGATATTGGTAAATACAATGACAATGACAACACAAATTACAATATTAATGGTCTTAAGAGTAGCAATAATGGCAATAACCGCCATAACAATGGTGGTGCTCATGTCAATAACAAAAGTAGTTGCAACTTTGATAGCACAAAGAGTAAAGACATTATCATCGACAGCCAAGACAATGACACTACTAAGGACATTGAGAATGACAACGACAACAAGTGCAACAAAAGTGTTAGAATTAAAGCCACTATCACTAGAAGCAACAACAACAATATTGGTGATGTTAAAATCAATGGAAGCAAGTGCAACAATGTTGATGATGTTCGAAACCTTGAGTATGGAAATAAAAATGAACAAATAGATGAAAGCATTGCTAAAAGTATCAATGATCACAACAAAGGAGCATATATATGCAACTACAACAAGAATTATAACAATGGTGACAAAAGCATTGACATAGGCCTCAATCACAACACTAATGCAGGTAAAAGCATTGACCATCAAATTAACAATATGAACTATGATACTGCTTATGCAAATGGAAATAATATATGCAATAGTGATAACACTAAAAGCAGTGACAATGACACTACCAACAAATATCATAAGAATGTTACAAATAATATTATTGTCGGTAGAGACAAAAATTGCAACAATGATATTTCCAAAAGTAGTGTCAATGGAAACAACATTCATACAAGTGCTTATCACATTGAGAATAATATTCAAAATAGTGACAATGCCAAAAACAAAATCGACAAAAGGAATAATAAAACCTTTATGACTGGTGACAACAACATCTATGACTCTAATGATTCTCATGTGAAAAACATATCTTCTAGTCATGATACTAAAAGAGTTGGAAATGGTAAGAAGATTATGAAAGATGAAAATTGTAAGAGTGGTGAAAATGGAAACAACATTCAAGCATGTACTTATCACACAGAGAATAATATCCAAAATAGTGATGGTGTTAAAAATGGAGAAAACAAAAGGGACAAAAGAAATAAAACATCTACAAGTGGAGACAACAATATATATGATTGTGATAATTCTTTTGTCAATAACATCTCCCACAATCATGATGCTAAGAAAGGTGGCAATGATAAAAAAATTATGAAAGAAGATAATTTCAAGAGTGGTGGATATGGAAACAACATCCACACATTTGTTTATCACAATGAGAATAATATTCAATATGGTGATAGTGCCAAAAATAGAGAAAATAGAAATGACATAAAACATAAAACTTTTACAAGTGGTGACAATAATATATATTATTGTGATGATTCTAACATTAACAACATCTCCAACATTCATGATGCTAAAAAAGATGGAAATTTTAAGAACATTATGAAAGATGATATTGCTAAGAGTGGTTGCAACAAAAATAACGTTTATGTTAGTCTTCATCACTATGAGAATAATACCCAAAGTAGCCATGGTGCTAGAAACGGGGAAAACAAATCGGACAAAATAAATAATAAAACATTTACAAGTAGAGACAATGATATTTATGGTTGTGATGAATCTTATGACAACATCTCCAAAAATCATGATGCTAAAAGAGGTGAAAATGACAAGACTATGAAAGATGATAATTCTAAGAGTGGTGATAATGGAAAGAATATTCATGCAATTTGTTATCACAATAAGAATAATATCCAAAGTAGTGATGTTGATAAAGATGGAGAAAAACAAACAAACAAACAAAATGATAAAATCTTTCCAAGTGGTGACAACAATATCTATGATTCTGATGATTCTTTTGTCCACAACATTCATGCACATGCTTATGACAATAAGAATAACATCCAAAGTAATGATCATGCTAAAAATGGAGAAAAAAAAAGTGAGAAAAGAAATAATAAGACATTTACAAGTGATGACAACAATATCAATGATTGCGATGATTCTTTTGTTAACTACATCTCCAACAATCATGAAGCTAAAAAGGGGGGAAAAGAGATGAAGATTGTGAAAGATGATAATTATAAGAGTGGTGGCAATAGAAAAAACATTCATGCAAATGCGTATCACAATGATAATAAAATCCAAAGTAGTGATGGTGCTAAAAAAGGAGAAAACAAAACTAACAAAATAAATAATAAAACCTTTACGAGAAGTGACAACAATATTTATGACTGTGATGATTCTGTCAACAATATTTCCAAAAATCTTGATGTTAAAAGATGTGAGAATGACAAGAAGATTATGAAGGATAATAATTCCAAGAGTTGTGGTAATGGAAACAACATTCATGCACATACTTGTCATAATGAGAAAAACACCAAAACCGATGATGGTGTTAAAAATGGAGGAAACAAATCTAATAAAAGAAATAATAAAATCTGTATGAGTGGAGGCAATAATACATACAATTTTGATGATTCTTACGTCAACAACATGCCCAATAATGGTGACACTAAAAGAGGTGAAACTGACAAGAAGATTATGAAAGTTGATAATTTTAAGAGTGGTGGCAAAGGAAACTACATTGATGCACACAATGAGAATAATATCCAAAATAGAACCTCTACAAGTGGTGACAACAATATACATGATTATGATGATTCTAAGTTCAACAACATCCTAATAAATCATGATGTTAACAAAGGTGGAAATGACAAAAAGATTATGAAAGGTGATAATTCTAAAAGTTGTGGTAATGCGAATAACATTCATGCAAGTGTTTATCACAACAACAACAATACTCATCGTAGTGATGATGTTAAAAATAGTGAAAACAAAACTAATAAAAAGAGTAATAAAACTTTTACAAGTAGTGACAACAATATCTATCAGTGTGATGATTCTTATGTCAACAACATGCCCAACAACCATGATGCTAAAAGTGGTGGGAATGACAAGAAGATTATGAAAAAGGATAATTCTAAGAGCAATGACAATGGAAACAACCTTCATGCAAGTGTTTATGACATTGATAATAATATTCAAAATAGTGATAGTGCTAAAAAGAAAGTTGACAAAAGGAATAATAAAACTTTTATGAGTGGTGACAACAATACCTATGTCTATGATGATTCTTATGTCAAGAACAACACCAACAGTCATGATGCTAAAAGCGATGGAAATGACAAGAAAGTTATGAAAGGTGACAATTCTAAGAGTAAAGGTCAGGGTGGTCACAAGAATGATGATGCTAAAATTAGTGGCAATAACTATAATGCCAACAATAATGGTACTTCAAAGAGTACATATCACAGTGGTCACATATGCAATGATGTTTATGCCAATAATATTCCCAACAATGATGATGACACTAAGAATAATGACAATGGTAATTACATTCGCAACATTGATGGTGTTAGAAATGGCAATAACAACAACAATAATAATGTCAATTCTAAGGACAACGGAAAAGGAAATAATAATCATAAAAGTGTTTACAACAATGGGAATGTCATTTGCAATAATGATGGTGTTAAAAAAGTTAGCATTGGTAATCACAAGGGTGATGATGGTAGTTCTAAAAGAGGTAACAATGATAACAACAATCACAACCTTTATGGCACCACCAACCCTAAGAATGATGGTGTTAAAAGAAATGTTAGTGACTATAAGAACTTAAAAAATAATGGTGTTTGTGGCAACAAAAGTAATAGTTACACTGATAAAAGTAATTCCTACAAGGATGAGCTCAACAATAATAGCATTGGAAGCAATGACAATGGCCACAATCTCAATGACTACAAGACTACAAGCAATCTCAATAACAATTCCAACTATAGAAACATCAATGGTTCTAAAAGTGTTGAGAACAATATCAATCATAATCAAGATCGTGCTAAAATCAATTATGATGCCAACAATAGTAAAATCAATGGCAGTCATAGTCACTCAAACAATAATTTCCAAAACAATAACAATGATATCGGTGACAAACGAAACAAGAATGAGAGACATTTGCAAAGTAGAAATCAATGTAATTAA 5865 0.3403 MTNAHGGSMLVELNAHNALHKPKFETLSHYEPPFITFNNEDDDFNLDHNHNYDDSNNNNASPYNMSPWNYHPNTSSPIKRSPWSLPNSTANHHNEDYPPETELIGSLVRETGHIYSLAVSGELLYAGSDSKNIRVWKHLKDFTGFKSNSGLVKTIVISDGKIFTGHQDGKIRVWKVSSKNPYNYKRIGSLPTFKEYVKCSMNPKNYVEVRRNKNAVKVKHFDAISSLSLNKEEGVLYSGSWDKTLKVWRLADSKCLDSISAHDDAVNAVVSLLEGSVLTGSADGTVKLWRRVNVQKGEKEKKSKHVLDRILLKQENAVTALAVNCMATIVYCGSSDGLVNFWKCDHKGEYLQGDVLRGHKLAVLCLATAGTLIFSGSVDNNICVWRHNENGFHTCHSVLIGHTGPVKCIAVEQQHPQSEREQGWIVYTGSMDNSVKVWHVSEHVSEVGTIQCKTTLNHFDSSCSSPRTMSVNSSISETYYSSPRKSIISHENDFDNRNSDATISTLSDNNKICDKEEKYYISGDTHDNIDDNSMRVIDYGRNKQSSSDVAKNNHSTNNKINTKSIKNDLKNVDDSKNDINDIKRVSENIDIIGNNNVDIGIHIMNDNKNHRTHGLKSNNNGDNTDVSKKIDISNNNNNVDIGKYNDNDNTNYNINGLKSSNNGNNRHNNGGAHVNNKSSCNFDSTKSKDIIIDSQDNDTTKDIENDNDNKCNKSVRIKATITRSNNNNIGDVKINGSKCNNVDDVRNLEYGNKNEQIDESIAKSINDHNKGAYICNYNKNYNNGDKSIDIGLNHNTNAGKSIDHQINNMNYDTAYANGNNICNSDNTKSSDNDTTNKYHKNVTNNIIVGRDKNCNNDISKSSVNGNNIHTSAYHIENNIQNSDNAKNKIDKRNNKTFMTGDNNIYDSNDSHVKNISSSHDTKRVGNGKKIMKDENCKSGENGNNIQACTYHTENNIQNSDGVKNGENKRDKRNKTSTSGDNNIYDCDNSFVNNISHNHDAKKGGNDKKIMKEDNFKSGGYGNNIHTFVYHNENNIQYGDSAKNRENRNDIKHKTFTSGDNNIYYCDDSNINNISNIHDAKKDGNFKNIMKDDIAKSGCNKNNVYVSLHHYENNTQSSHGARNGENKSDKINNKTFTSRDNDIYGCDESYDNISKNHDAKRGENDKTMKDDNSKSGDNGKNIHAICYHNKNNIQSSDVDKDGEKQTNKQNDKIFPSGDNNIYDSDDSFVHNIHAHAYDNKNNIQSNDHAKNGEKKSEKRNNKTFTSDDNNINDCDDSFVNYISNNHEAKKGGKEMKIVKDDNYKSGGNRKNIHANAYHNDNKIQSSDGAKKGENKTNKINNKTFTRSDNNIYDCDDSVNNISKNLDVKRCENDKKIMKDNNSKSCGNGNNIHAHTCHNEKNTKTDDGVKNGGNKSNKRNNKICMSGGNNTYNFDDSYVNNMPNNGDTKRGETDKKIMKVDNFKSGGKGNYIDAHNENNIQNRTSTSGDNNIHDYDDSKFNNILINHDVNKGGNDKKIMKGDNSKSCGNANNIHASVYHNNNNTHRSDDVKNSENKTNKKSNKTFTSSDNNIYQCDDSYVNNMPNNHDAKSGGNDKKIMKKDNSKSNDNGNNLHASVYDIDNNIQNSDSAKKKVDKRNNKTFMSGDNNTYVYDDSYVKNNTNSHDAKSDGNDKKVMKGDNSKSKGQGGHKNDDAKISGNNYNANNNGTSKSTYHSGHICNDVYANNIPNNDDDTKNNDNGNYIRNIDGVRNGNNNNNNNVNSKDNGKGNNNHKSVYNNGNVICNNDGVKKVSIGNHKGDDGSSKRGNNDNNNHNLYGTTNPKNDGVKRNVSDYKNLKNNGVCGNKSNSYTDKSNSYKDELNNNSIGSNDNGHNLNDYKTTSNLNNNSNYRNINGSKSVENNINHNQDRAKINYDANNSKINGSHSHSNNNFQNNNNDIGDKRNKNERHLQSRNQCN 1954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1727 1783 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 951 980 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 908 938 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1727 1872 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1395 1411 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 656 680 - -
Viun11g02361 1954 SMART WD40_4 349 386 IPR001680 GO:0005515
Viun11g02361 1954 SMART WD40_4 100 137 IPR001680 GO:0005515
Viun11g02361 1954 SMART WD40_4 304 343 IPR001680 GO:0005515
Viun11g02361 1954 SMART WD40_4 252 290 IPR001680 GO:0005515
Viun11g02361 1954 SMART WD40_4 138 175 IPR001680 GO:0005515
Viun11g02361 1954 SMART WD40_4 211 249 IPR001680 GO:0005515
Viun11g02361 1954 SMART WD40_4 392 439 IPR001680 GO:0005515
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1603 1623 - -
Viun11g02361 1954 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 49 444 IPR045182 -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1113 1137 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1542 1556 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1624 1638 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 616 631 - -
Viun11g02361 1954 SUPERFAMILY WD40 repeat-like 101 442 IPR036322 GO:0005515
Viun11g02361 1954 MobiDBLite consensus disorder prediction 47 98 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1557 1587 - -
Viun11g02361 1954 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 217 250 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1790 1804 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1150 1176 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1913 1936 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1246 1263 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1393 1424 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 51 94 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1663 1689 - -
Viun11g02361 1954 ProSiteProfiles Trp-Asp (WD) repeats profile. 217 258 IPR001680 GO:0005515
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1805 1872 - -
Viun11g02361 1954 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 289 IPR001680 GO:0005515
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1149 1218 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 612 631 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 913 936 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1522 1541 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1588 1602 - -
Viun11g02361 1954 Gene3D - 296 567 IPR015943 GO:0005515
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1913 1954 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1319 1341 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1639 1662 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1193 1207 - -
Viun11g02361 1954 Pfam WD domain, G-beta repeat 254 289 IPR001680 GO:0005515
Viun11g02361 1954 Pfam WD domain, G-beta repeat 220 248 IPR001680 GO:0005515
Viun11g02361 1954 Pfam WD domain, G-beta repeat 395 438 IPR001680 GO:0005515
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1236 1268 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1510 1707 - -
Viun11g02361 1954 MobiDBLite consensus disorder prediction 1691 1707 - -
Viun11g02361 1954 CDD WD40 111 438 - -
Viun11g02361 1954 Gene3D - 213 295 IPR015943 GO:0005515
Viun11g02361 1954 Gene3D - 83 212 IPR015943 GO:0005515
Viun11g02361 1954 ProSiteProfiles Trp-Asp (WD) repeats profile. 356 385 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02361 Viun-Chr11 37638651 37644515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02361 162 386 Acyl Lipid Metabolism Gene Families AT3G18860 28.340 5.00e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02361 - - vun:114170412 3786.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02361 11 37638651 37644515 Viun11g02361 11 37638651 37644515 ECH