Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02358 ATGGCTTCGCTTCTGAAAAATCTACGTCCCGGTGTGCCTTCTGTTCATGATGATGGTGGCGATTTCAGCTATGAGTACTCTTTTGCTGAGGAATACAAAGGTCCTCCTCTCGGTTACTCCGTCCCAGAAGTTCTTCCTTTCAACCTTGACCAAGTCCCGTTTGCACCTGTTGCTCGTTCTCCCCCTCACAACTTGTCCCTCCCAGTGATCCAACCCTTTAGAAAAACCAATGCAGAATTGGCTTCAACAACTGCTTCTGTTTCTTCTGATCCACTGTCAATCAAACAAGAGGATCACGATGACGATGATGATGATGATGATGATGACCCTTTTAACCCAAAACATGTTAAACGGCCCTCCGTGGTGACTTTTCGTGATCCTGAGACAAATGAGATAGAGGAGGATGAAGAGATTGTTGAAGCTGCAAGTGGAGAAAGTAGTGGTAACAATGGTAAACGTGTGAGGCCGCATGCTGAGAGAGTTGGGAAGAAGGGTTCGTGCTATCGATGCCTTAAAGGGAGTCGTCTAACTGAGAGGGAGGTTTGCATTGTTTGCGGTGCAAAGTTTTGTCGCAAGTGTGTGGTTAGAGTAATGGGGTCCATGCCTGAAGGCAGAAAATGTGTCACTTGCATTGGTCACAGAATTGATGAGACCATGCGAGGGAAGCTTGGAAAACCTTCTCGGATGCTCAAGTGCTTGTTGTCTAAGGCTGAAGTGAAACAAATCATGAAGGATGAGATGTTTTGTGAAACAAATCAAATACCAGCAGAAGATGTTATTGTGAATGGAGAACCTCTCGACTGGGATCAGCTCACGCTGCTTTTGACCTGTTCAAACCCCCCAAAAGGATTGAAACCGGGTTTCTATTGGTATGATAAAGCATCTGGCTTTTGGGGAAAGGAAGGTCAACGACCATGTCAAATTATTAGCCCACAGTTGGAGGTTGGGGGTCACTTGCAGAGAAATGCAAGCAATGGAAAGACAGAAGTAACTATAAATGGTCGAGAGATTACCAAAGAAGAGCTATGGATACTGAAGTGGGCAAGAGTGCCATGTGATGGAACAACAGACTTTTGGGTGAGCCATGATGGATCATACATGGAAGTGGGACAGAAGAATGTGAAGGGCCACATATGGGAGAAGTCTACAGTGAAGCTTGCTTCTCTAATTCTATCCCTTCCAGTTCCTTCTAGCTCCTTAACTCCTGCTGGTGAAGGAGAAAGTGGAATTAGCGAACACAACATTGAACAGAAAATGCTTCACAAATATTTACTTGTCGGTTCTGTCAATTCTGGAACATGTACCATATATAAACAGGCCAGGCTTCTGTATAATGTTCCTTTCTCTGGAACCGAGCTCCACAACATGAAGCTGGTAATTCAAAGAAACTTGTATAGGTACCTTGGTATCATACTAGAGGCGCGAGAAATTTTTGAAGAGAGTTTGTATATAAAAAGTAACGAACAACATGTTGGTGAATCAACTTCTTCTGGGATTGCTGGAGAAATCATTGACACGACAACCTATTCCATTAGTCCAAGACTAAGAACTTTCTCCGATTGGCTACTCAAATACATGATGTCTGGTAACTTGGATGAAATATTCCCAGCAGCTGCTCGTGAATATGCCCCAGTGGTGGAGGAACTGTGGAGGGATTCAGCCATTCAGGCCACGTACAACAGAAGAAATGAGATAAAAAATCTGCCAAAAACTGCAAGCTACTTTCTTGAACGGGCTGTTGAAATTTCAAGGATAGATTATGAACCCTTGGAGATGGACATCTTGTATGCTGAGGGGATAACCTTATCCAATGGCCTTTCTTCCATGGAGTTTTCATTTCCTGTGTCAGGTCATGAGGACTCATTGGACCCTGTGTATCGACATGATCCTTTACTCAGGTATCAGCTCATCAGAGTAAATTCAAAAAGCCTTGGAGAAAAATGCAAGTGGTTGGACATGTTTGAAGACACTGATGTAGTCTTGTTCTCAGTGGCCTTAACTGACTATGATGAGTACACGGTAGACAGTGAAGGAGCTGTTACCAACAAAATTTTAGCAGCCAAACATCTCTTTCAAAACATCATCACTCATAGAGTCTTCAGCAACACCAAATTTCTTCTGATATTGACCAAGTTTGATCTGTTCGAGGAAAAGATTGAACAGGTTCCTCTAACACAGTGTGAATGGTTTTTTGACTTTGATCCAGTTATTAGCCACAACCATAAAACCGCTGCTATTAGCAAACGCAGCAACCATCCTCCACTGGCTCAACGTGCTTTTCAATACATTGGTATGAAGTTCAAAAGCTGGTTCAATTCTCTAACTGGTCAAAAGCTGTTTGTTTCACGGGTTACTGGGTTGGAACCTTCTACTGTTGATGAAGCTCTCAGATATGCCAGAGAGGTTATGGTGTGGCAAAAATGGGACCCCTCTTTGAGAAATGAAAAGTCTGAGATAACATCCACAACTTTTGAGGCAAGCTCTGAAGAAAAATTTAATAACTATAATCACCACTAG 2517 0.4299 MASLLKNLRPGVPSVHDDGGDFSYEYSFAEEYKGPPLGYSVPEVLPFNLDQVPFAPVARSPPHNLSLPVIQPFRKTNAELASTTASVSSDPLSIKQEDHDDDDDDDDDDPFNPKHVKRPSVVTFRDPETNEIEEDEEIVEAASGESSGNNGKRVRPHAERVGKKGSCYRCLKGSRLTEREVCIVCGAKFCRKCVVRVMGSMPEGRKCVTCIGHRIDETMRGKLGKPSRMLKCLLSKAEVKQIMKDEMFCETNQIPAEDVIVNGEPLDWDQLTLLLTCSNPPKGLKPGFYWYDKASGFWGKEGQRPCQIISPQLEVGGHLQRNASNGKTEVTINGREITKEELWILKWARVPCDGTTDFWVSHDGSYMEVGQKNVKGHIWEKSTVKLASLILSLPVPSSSLTPAGEGESGISEHNIEQKMLHKYLLVGSVNSGTCTIYKQARLLYNVPFSGTELHNMKLVIQRNLYRYLGIILEAREIFEESLYIKSNEQHVGESTSSGIAGEIIDTTTYSISPRLRTFSDWLLKYMMSGNLDEIFPAAAREYAPVVEELWRDSAIQATYNRRNEIKNLPKTASYFLERAVEISRIDYEPLEMDILYAEGITLSNGLSSMEFSFPVSGHEDSLDPVYRHDPLLRYQLIRVNSKSLGEKCKWLDMFEDTDVVLFSVALTDYDEYTVDSEGAVTNKILAAKHLFQNIITHRVFSNTKFLLILTKFDLFEEKIEQVPLTQCEWFFDFDPVISHNHKTAAISKRSNHPPLAQRAFQYIGMKFKSWFNSLTGQKLFVSRVTGLEPSTVDEALRYAREVMVWQKWDPSLRNEKSEITSTTFEASSEEKFNNYNHH 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02358 838 SUPERFAMILY Transducin (alpha subunit), insertion domain 448 597 IPR011025 GO:0007165
Viun11g02358 838 Gene3D - 422 786 IPR027417 -
Viun11g02358 838 ProSiteProfiles G-alpha domain profile. 419 818 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun11g02358 838 SMART galpha_1 407 787 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun11g02358 838 FunFam Extra-large guanine nucleotide-binding protein 2 455 600 - -
Viun11g02358 838 Gene3D - 455 600 IPR011025 GO:0007165
Viun11g02358 838 MobiDBLite consensus disorder prediction 81 120 - -
Viun11g02358 838 FunFam Guanine nucleotide-binding protein subunit alpha 631 750 - -
Viun11g02358 838 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 807 IPR027417 -
Viun11g02358 838 Pfam G-protein alpha subunit 415 801 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun11g02358 838 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 198 807 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Viun11g02358 838 SUPERFAMILY FYVE/PHD zinc finger 164 214 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02358 Viun-Chr11 37615799 37619967 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02358 - - gmx:100791124 1348.57