Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02311 ATGACGGTGGACGATCGGTTCGCACATTTGAACCCTAAGAAGTGCGTGGTTGTAGGTGGCAGAGGATTCCTCGGAAGATCATTGGTTCTCAGATTGTTGAAACTCGGTAACTGGATCGTCCGAATCGCCGATTCCGCTCAGTCTCTCCAGCTCCTTAACTCCGAGTCCGTCCTCGCGCAAGCTCTCTCTTCCGCACGCGCTTCTTACTTCCACATCGACCTTGCCGATAAATGCAACGTTGTCAAAGTTCTAGAAGGTTCTTCTGTTGTGTTTTTTATGGATGTTGCTGGAGTTGATGTTAATGACTTCTATACTTGTTACAGGCTAATAGTTCAAGGAGCAAAGAATGTAATTAGTGCTTGTCGAGAATGTAGAGTGAAACGCCTAATATATAACAGTTCCGCGGATGTAGTATTTGATGGTTTGCATGATATTCGTAATGGAGATGAGTCGTTGGCCTATCCGTGGAAAACTGACGATATGTTGAGTGACCTTAAGGCTCAAGCGGAATCTTTGATCCTGAGTGTCAATGACATTGATGGCCTATTGACGTGCTCTCTTCGCCCTAGTAATGTTTTTGGACCTGGTGACACAGAATTTGTACCATATTTTCTCAAGTCAGCAAGATATGGTTTTACAAAGTTTATTATAGGGACTGGTGATAATCTTTCAGATTTCACCTTTTCTGAAAATGTTACCCATGCCCACATCTGTGCTGAAGAAGCCCTAAATTTCCAAACAGTTTCTGTGGCAGGAAAGGCCTTTTTCATCACGAATGATGAGCCAATACAATTCTGGGAATTTCTTTCGCTTTTGTTAGAAGGTCTTGGATATCAAAGGCCATATGTCAAACTTCCGGCTAAGTTGGCTCAATATATTCTATCAGTTTTGAAGTGGTCACATGAAAAGTTGGGATCCAGATACTTCAGCTATCCGTTATTAGTTCACTTTTTTCAGATAGCTTCATACACCCGAACTTTCAACTGCACAGAGGCTCACAAACATCTTGGATACTCACCAATAGTCTCCCTCGAGGAAGGAGTCACATTAACAATAGAATCATTCTCTTATTTATCCAAAGACTCATGTTTATCAAGAAGCTTCAGTTCCACTGAACAGTCAAAAGCGGATAAATTGCTGGGTGGAGGAAAAGTGGCTGACATTTTGTTGTGGAGAGACGAGAAGAAATCATTTACATATTTTGCTGTGCTGGTTTTGTTGTTTTACTGGTTTTTCCTTTCTGGAAGAACTTTTATATCATCTGCTGCAAAACTTTTGCTGCTTGCCACGTTGCTTTTTTACGGACATGGTTTTCTGCCATCAAAGTTGTTTGGTTTTAATATACAAAGGATACCCTTGTCTTATTTTGAGATCTCTGATGCGGTAGTGAAAGATTCAGTTATAACTACAGTATGTCTCTGGAATAAGGGTTTTCAAATAATAAGAAGATTGGCCCATGGGGAAGACTGGTCTGCATTCTTCAAGATTGCAGTTTTTCTTTACCTTATGAAGATGTTCCTGTCAAAGTTGTTGACAATATTGATAGGCATAGGTTTGGTGTTCGCATTTATGGGATTTTTTGTGTACGAGCAATATGAATCAGAAATTGATGGAATGGTTGATGTTCTTTTCACCAGTTTGAAAGAGTTCATGATATATTTGATGAGTATTTCTCCTGTTTTTATATCGAGGCTTCTGCGTTATCATGACAACTTTCAGCAGTATGAAAAGAAAGGTTAA 1740 0.4 MTVDDRFAHLNPKKCVVVGGRGFLGRSLVLRLLKLGNWIVRIADSAQSLQLLNSESVLAQALSSARASYFHIDLADKCNVVKVLEGSSVVFFMDVAGVDVNDFYTCYRLIVQGAKNVISACRECRVKRLIYNSSADVVFDGLHDIRNGDESLAYPWKTDDMLSDLKAQAESLILSVNDIDGLLTCSLRPSNVFGPGDTEFVPYFLKSARYGFTKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKAFFITNDEPIQFWEFLSLLLEGLGYQRPYVKLPAKLAQYILSVLKWSHEKLGSRYFSYPLLVHFFQIASYTRTFNCTEAHKHLGYSPIVSLEEGVTLTIESFSYLSKDSCLSRSFSSTEQSKADKLLGGGKVADILLWRDEKKSFTYFAVLVLLFYWFFLSGRTFISSAAKLLLLATLLFYGHGFLPSKLFGFNIQRIPLSYFEISDAVVKDSVITTVCLWNKGFQIIRRLAHGEDWSAFFKIAVFLYLMKMFLSKLLTILIGIGLVFAFMGFFVYEQYESEIDGMVDVLFTSLKEFMIYLMSISPVFISRLLRYHDNFQQYEKKG 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02311 579 ProSiteProfiles Reticulon domain profile. 385 579 IPR003388 -
Viun11g02311 579 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 286 IPR002225 GO:0003854|GO:0006694|GO:0016616
Viun11g02311 579 Pfam Reticulon 385 541 IPR003388 -
Viun11g02311 579 FunFam Reticulon-like protein 6 360 - -
Viun11g02311 579 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 355 IPR036291 -
Viun11g02311 579 Gene3D - 6 358 - -
Viun11g02311 579 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 13 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02311 Viun-Chr11 37424888 37430679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02311 16 352 Lipid Metabolism Gene Families AT2G33630 29.121 2.13e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02311 K23558 - gmx:100794808 937.947