Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02300 ATGGGGAAGCCTTTGTTTTACGAGATCTTGGAAAAACCTGCCACAAGTTGTATCATAGGATTATGCAGCATGATTTGGTTCTATATACAGAAGAAAAATATTGGGTATTCACAGGTGGGTTTGAGTTATGAGACCGCAGTGGAAGGGCATTATTGGAGGATAATTACTTCTGCTTTTTCTCATATTAGTGTTATTCATCTTGTTTTTAACATGAGTGCATTATGGAGTCTTGGAGTGGTAGAACAGCTTGGGCACTTAGGCCTTGGTGTTGAGTACTACTTGCAGTACACACTTGTGTTGGTTATTGTATCAGGAGTGCTGGTTTTGGCAATGTATCATTTGTTGATTCAGAGATTCAAGCTTGAGTATTTTCGTCGAGTGACAGCTGTTGGGTATTCCTGTGTTGTTTTTGGGTGGATGACAATTCTCTCTGTAAAGCAACCATCTTCAAAGTTGGATCTCTTTGGGTTTCTTTCACTTCCTATCAGTTTTGCGCCGTTTGAATCGCTTATTTTCACTTCGATCATCGTTCCTCAGGCAAGTTTTCTTGGGCATTTGTCAGGGATTGTTGTTGGATATGCTATAGCATGGGGTTTGATTCATGGCATGAGCAATTACTGGGCACTCTCCTTGTTGGGATGGATTATGCTTGTCTTTGTTTTTAGTTTGAAGAGATCTGGTGCTCTTGACCTAAGCTTTCTTGAGATTGAATCTGTTACCGATCCTTCCTTACCTTCTGTGAGGTTTTTGGCATCAAGCACTGGCAGAACACTTCAGATGAGTGCTTTGCCAAATGGAAATGTTGATATTGTCTAA 816 0.4056 MGKPLFYEILEKPATSCIIGLCSMIWFYIQKKNIGYSQVGLSYETAVEGHYWRIITSAFSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVIVSGVLVLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIMLVFVFSLKRSGALDLSFLEIESVTDPSLPSVRFLASSTGRTLQMSALPNGNVDIV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02300 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016020
Viun11g02300 271 FunFam RHOMBOID-like protein 13 9 201 - -
Viun11g02300 271 Gene3D - 10 198 IPR035952 -
Viun11g02300 271 PANTHER RHOMBOID PROTEASE 13 211 - -
Viun11g02300 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02300 Viun-Chr11 37389555 37391186 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02300 - - gmx:100818954 516.538