Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02229 ATGGAGAAGTATTTGGTTTCGCGTAAACCCTCGATTGAAAGTGTTCGGCCACTTCCAAGGAGGAGGCAATGGAAGAGGAGTTCGGTTGAACTAAATGGGAGATTTGAGCGTAACTACCGTCATGAGATGTTGGATCTGCTAATTCGATCGTACTCTGAGGTTGGAGTGTTTCCGCATCTGTATCAAGTGGACGGTTTGCCATGCCAGTCTCATACAAATCGATTGGTTGGTGAGGCAAATGGTGATGGCCATCTCCCATTTAGAAAGCAAGGCATCTCTGCAGTAGATTTTGACAACAAGGGAATATACTTGGTGTCTGTGACCAAATCGGGTTGCTTAACAGTTCACGACTTTGAAACTCTTTATTGCCAGACACCTGAGTTAACTTGCTTGCGAGAAGATGAAAGCAAACATTTAATGCACCTGTCACTAAATCGACAACTTGATGCAGTCAGATGGAATCCTCTTAATCAGGATGAGGTTGTTTGTGCATCTGTCAAAAGTAATGAAGTACTAATATTCGATATTGGATATGTCTCATCCGATCCAGTTGAAGTATTAAGAACAAGACGTACAGCCACAGTTAATGGATCCACCTTGCACAAAGGTCTCTCTGATGTCACTTTTACGTCAAATGACACAAGGATACTTGCTTCTGATACACATGGTGCGATTAATGTCTGGGATAGAAGAGTGAACTCTCTACCTTGCCTTGAGCTTGCGTCTGCTTCATGTGGTACGCTTAACAGCATCCAATTAAATGCAGATAATCAGATTATTTATGGTGCTGGAAAACATGGGCTCGTGCATGTATGGGATATTCGTGGTGGAAGAGCATCTGCCACTTTTCAAAGTCTCAAAGAGATATGCCATCCACCAATAAAATCAGTGAAGTTGGCAACATTGCTTGAGAAGATTGGATCTTTGAAGGCACAGGCAAATATTGTTCCCAAGGAGATTCACTCTATTAATATTAATCCATCATGCCCATATCAGTTAGCATTCCATCTTGTCGATGGCTGGTCAGGCGTTTTGGATATTAATACTTTTGAAGTTACCCATATTCATTGCCCACCTCCTGCTTGGTTAAACGATTCCTACGTTCCCGCTGATCTATCATACTTAAGAAAACCTTCATGGTTATCAACTTGTTCGATCTATTTGGCCGGGTCATCATCTGATTGTGGTATCCATCTCCTGGATTTTTATCCCAGCACCAACTCACCAAGCCATGTGGATTACAAGGAGGATATGCAAGAACTTTCAAGGCGGAAAAACCGAAGTAATCAGAACAGATTTATTTCTTTATCTGAAGGAGTTATCTCATGTGTTGCTCACCCTTTGTATAATGCTATCGTGGCAGGAACCAAGAAAACTTCTTTGCTCGTGATTTCTCAAAGGCAAGAGTCATTCAGAAGTGAAGATTAG 1428 0.4181 MEKYLVSRKPSIESVRPLPRRRQWKRSSVELNGRFERNYRHEMLDLLIRSYSEVGVFPHLYQVDGLPCQSHTNRLVGEANGDGHLPFRKQGISAVDFDNKGIYLVSVTKSGCLTVHDFETLYCQTPELTCLREDESKHLMHLSLNRQLDAVRWNPLNQDEVVCASVKSNEVLIFDIGYVSSDPVEVLRTRRTATVNGSTLHKGLSDVTFTSNDTRILASDTHGAINVWDRRVNSLPCLELASASCGTLNSIQLNADNQIIYGAGKHGLVHVWDIRGGRASATFQSLKEICHPPIKSVKLATLLEKIGSLKAQANIVPKEIHSININPSCPYQLAFHLVDGWSGVLDINTFEVTHIHCPPPAWLNDSYVPADLSYLRKPSWLSTCSIYLAGSSSDCGIHLLDFYPSTNSPSHVDYKEDMQELSRRKNRSNQNRFISLSEGVISCVAHPLYNAIVAGTKKTSLLVISQRQESFRSED 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02229 475 Gene3D - 69 471 IPR015943 GO:0005515
Viun11g02229 475 SMART WD40_4 188 229 IPR001680 GO:0005515
Viun11g02229 475 SMART WD40_4 234 273 IPR001680 GO:0005515
Viun11g02229 475 SMART WD40_4 72 117 IPR001680 GO:0005515
Viun11g02229 475 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 88 464 - -
Viun11g02229 475 Coils Coil 411 431 - -
Viun11g02229 475 SUPERFAMILY WD40 repeat-like 88 457 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02229 Viun-Chr11 37046206 37058619 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02229 - - gmx:100780441 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02229 11 37046206 37058619 Viun11g02229 11 37046206 37058619 ECH