Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02194 ATGGCACACACTCTGACACTACCACCCATCTCTTACACTCTCGCTAAAACCCTAAAACCCATTTCTCCATTCCACAAATCTCTTCCCTTCTCCTCTCCAACCCTTTCTCGTCTAAAGCACACTCGACGCTCCCTATCCCGCTCCGTTCAGCGCTCTACCGTCGGCAAATTCTCCGGCAGTGTCGACGATGAAGAAGAATCAGAGGAACTGGACGAGCTCGATGTCATCGCCCTCGAGCAAGAAGCAAAGGACGCTGCCCAAGCTTATTCAAACTCTCTGTCTCAAGTTCTGAGCATCGACGAGGAGAAAAATGATCGCAAGGAAACAGCTCAATCCCGCAGGAGGAATACACGGAGAACAAAATCTATCCCGGACAATCTTCTCCAAAGGGTTGCAATTGTTGGAAGGCCAAATGTTGGCAAGTCAGCATTATTTAATCGTCTTGTTGGGGGAAACAGGGCTATTGTGGTTGATGAACCTGGGGTTACCAGGGATCGTTTATATGGTCGATCGTATTGGGGGGAGCATGAGTTCATGGTAGTGGACACAGGCGGGGTTATCACTGTTTCAAAGTCACAAGCTACTGTTATGGAAGAGCTGGCTATTACTACTACCATTGGTATGGATGGCATTCCACTTGCTGTTAGAGAAGCAGCTGTTGCCAGGATGCCCTCAATGATCGAGAGACAAGCAACTGCAGCTGTGGAAGAATCATCTGTTATTATTTTCCTGGTCGATGGTCAGGCAGGACTAACAGCAGCTGATGAGGAGATTGCTGATTGGCTACGTAAAAACTACTCAGATAAATATGTCATTCTGGCAGTTAACAAGTGTGAATCTCCTCGCAAAAGAATTATGCAGACATCTGAATTTTGGTCCCTTGGATTTGAACCACTTCCAGTATCAGCAATCTCAGGGACTGGAACTGGAGAGCTTCTTGACCTTGTTTGTTCTGGCTTACAGAAAGTTGAGGAATCAAATATTCTTGATGAAGTAGAAGATTATGTTCCGGCAATTTCAATTGTTGGTAGACCAAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGACAGAACAATAGTTAGCCCCATCAGTGGCACTACTCGTGATGCTATTGATACTGAATTTACTGGACCAGATGGACAGAAGTTCCAACTTATTGATACTGCTGGAATCAGGAAAAGAGCAGCCATTGCATCAGCTGGGAGTACAACAGAGGCTTTGTCAGTGAATCGAGCATTTCGTGCTATTCGTCGTTCTGATGTTGTTGCTCTTGTCATCGAGGCCATGGCTTGTATCACAGAACAGGACTACAAGATAGCTGAGAGGATAGAAAAAGAAGGAAAAGGTTGTGTGATAGTTGTAAATAAGTGGGATACAATACCAAATAAAAAGCAGCAGACTGCATTACACTATGAGGAAGATGTCAGAGAGAAGCTTCGCTCACTTGATTGGGCTCCAATTGTTTATTCTACTGCTATAGCTGGTAACAGTGTTGACAAGATTATTGTTGCAGCTAGTGAAGTTGAAAAGGAAAGATCTAGAAGACTTGGCACTTCTATATTAAATCAAGTAGTTCTGGAAGCAGTAGCTTTTAAGCCTCCTCCTAGGACACGTGGTGGAAAAAGAGGGCGTGTTTACTACTGCACTCAGGCTGCTATAAGGCCACCTACATTTGTGTTCTTCGTCAATGATGCAAAACTTTTTCCTGAGCCATACAGGCGCTATATGGAGAGGCAGCTGCGTAAGGACGCAGGTTTTTCTGGAACACCCATACGACTTCTATGGCGCAGCAGAAGGAAAATGGGCAAAGATGAAGGAAAAGCAGTAACAAGGACCCAAGAGAATCTTACATCAAATGATCCAAAATTGGTACTAACTGCATCATAG 1899 0.446 MAHTLTLPPISYTLAKTLKPISPFHKSLPFSSPTLSRLKHTRRSLSRSVQRSTVGKFSGSVDDEEESEELDELDVIALEQEAKDAAQAYSNSLSQVLSIDEEKNDRKETAQSRRRNTRRTKSIPDNLLQRVAIVGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGEHEFMVVDTGGVITVSKSQATVMEELAITTTIGMDGIPLAVREAAVARMPSMIERQATAAVEESSVIIFLVDGQAGLTAADEEIADWLRKNYSDKYVILAVNKCESPRKRIMQTSEFWSLGFEPLPVSAISGTGTGELLDLVCSGLQKVEESNILDEVEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFQLIDTAGIRKRAAIASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKKQQTALHYEEDVREKLRSLDWAPIVYSTAIAGNSVDKIIVAASEVEKERSRRLGTSILNQVVLEAVAFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPEPYRRYMERQLRKDAGFSGTPIRLLWRSRRKMGKDEGKAVTRTQENLTSNDPKLVLTAS 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02194 632 NCBIfam ribosome biogenesis GTPase Der 222 599 IPR016484 GO:0005525
Viun11g02194 632 PANTHER GTPASE DER 103 623 - -
Viun11g02194 632 Gene3D - 519 603 IPR015946 -
Viun11g02194 632 FunFam GTPase Der 126 327 - -
Viun11g02194 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 297 606 IPR027417 -
Viun11g02194 632 FunFam GTPase Der 332 514 - -
Viun11g02194 632 MobiDBLite consensus disorder prediction 615 632 - -
Viun11g02194 632 MobiDBLite consensus disorder prediction 29 68 - -
Viun11g02194 632 MobiDBLite consensus disorder prediction 100 121 - -
Viun11g02194 632 NCBIfam small GTP-binding protein domain 337 505 IPR005225 GO:0005525
Viun11g02194 632 Pfam 50S ribosome-binding GTPase 339 460 IPR006073 GO:0005525
Viun11g02194 632 Pfam 50S ribosome-binding GTPase 130 277 IPR006073 GO:0005525
Viun11g02194 632 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 337 517 IPR031166 GO:0005525
Viun11g02194 632 Gene3D - 127 328 IPR027417 -
Viun11g02194 632 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 519 600 IPR032859 -
Viun11g02194 632 Hamap GTPase Der [der]. 128 603 IPR016484 GO:0005525
Viun11g02194 632 FunFam GTPase Der 515 603 - -
Viun11g02194 632 PRINTS GTP1/OBG GTP-binding protein family signature 339 359 IPR006073 GO:0005525
Viun11g02194 632 PRINTS GTP1/OBG GTP-binding protein family signature 389 404 IPR006073 GO:0005525
Viun11g02194 632 CDD EngA1 132 320 - -
Viun11g02194 632 MobiDBLite consensus disorder prediction 606 632 - -
Viun11g02194 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 130 320 IPR027417 -
Viun11g02194 632 CDD EngA2 339 512 - -
Viun11g02194 632 Gene3D - 333 517 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02194 Viun-Chr11 36806938 36813874 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02194 - - gmx:100777588 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02194 11 36806938 36813874 Viun11g02194 11 36806938 36813874 ECH