Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02183 ATGTCGATTGTTCCGATGAACCAGGACGAGGGAAACGCCTTCAATCTCTTGGCTCAGTGGGATCCGTTCCTCGATTTTCCTCTCCCTCCATCCATCTCCAACTTCTTCCCCGGTTTCGAATTCGGATCCGGGTCGTCGGTGAAGACGCGTGTGGACTGGAGGGAGACACCCAGAGCACACCTGTGGGAGGTGGCGCTTCCCGGCTTCACCAACGAAGACGTGCTGGTGGAGCTCCAAGACGAGAGGGTGCTCCAAGTGAGCGTGGAGAGTGGGAACTTCACGACCAGGTTCAAGATCCCCGACAACGCGAACCTCGAACAACTCAAAGCCAACATGCGTCACGGGGTTCTGGTTGTAACCGTTCCCAAGGTTCACCAACCGCTTCCCCCACCGTCTAGTAGGAACATCAGGGTCGTTGAAATCGACGGCACCGACTGA 438 0.5685 MSIVPMNQDEGNAFNLLAQWDPFLDFPLPPSISNFFPGFEFGSGSSVKTRVDWRETPRAHLWEVALPGFTNEDVLVELQDERVLQVSVESGNFTTRFKIPDNANLEQLKANMRHGVLVVTVPKVHQPLPPPSSRNIRVVEIDGTD 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02183 145 Pfam Hsp20/alpha crystallin family 52 138 IPR002068 -
Viun11g02183 145 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 142 IPR002068 -
Viun11g02183 145 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 47 127 IPR031107 -
Viun11g02183 145 FunFam 18.5 kDa class I heat shock protein 13 143 - -
Viun11g02183 145 SUPERFAMILY HSP20-like chaperones 26 127 IPR008978 -
Viun11g02183 145 Gene3D - 13 139 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02183 Viun-Chr11 36749665 36750377 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02183 K13993 - gmx:100797426 223.402