Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02176 ATGAGCAGTGATAGGAGAATCGGGGTGGCCGTGGATTTCTCTAAAGGAAGTAAGATCGCTCTCAAATGGGCAATCGATAATCTTCTCCGCAACGGCGACACACTCTTCATCGTCCACATCAAGCACGCCCAAGGCAGTGAATCCCGAAATCTTCTCTGGTCCACCACTGGATCACCACTGATTCCGTTGTCGGAGTTTCGTGAGAAGGATGTGATGCATCACTATGAGGTGGATTCTGATGCCGAGGTGTTGGACCTGCTTGACACCGCTTCTAAGCAGAAACAGGTGACTGTGGTGGCAAAGCTGTACTGGGGAGATGCAAGAGAGAAAATTTGTGAAGCTGTTGGGGATTTGAAGCTTCACTCTTTGGTCATGGGTAGCAGAGGCTTGGGTGCCATACAGAGGGTATTGCTGGGGAGTGTGACCAATTATGTCACCATAAATGCAAGTTGCCCTATAACGATTGTGAAAGACTCTGCTCCTTCCACTATCTGA 495 0.4909 MSSDRRIGVAVDFSKGSKIALKWAIDNLLRNGDTLFIVHIKHAQGSESRNLLWSTTGSPLIPLSEFREKDVMHHYEVDSDAEVLDLLDTASKQKQVTVVAKLYWGDAREKICEAVGDLKLHSLVMGSRGLGAIQRVLLGSVTNYVTINASCPITIVKDSAPSTI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02176 164 FunFam Universal stress protein family protein 1 160 - -
Viun11g02176 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Viun11g02176 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Viun11g02176 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Viun11g02176 164 CDD USP_Like 6 156 - -
Viun11g02176 164 Gene3D HUPs 2 163 IPR014729 -
Viun11g02176 164 PANTHER IMP2'P 1 159 - -
Viun11g02176 164 Pfam Universal stress protein family 5 157 IPR006016 -
Viun11g02176 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02176 Viun-Chr11 36711895 36713818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02176 4 46 Receptor kinase-like Gene Family AT5G35380 46.512 8.76e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02176 - - gmx:100306505 292.737