Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02166 ATGCATATGAATTCCCTCATAAATCCAACTTCTTATCTTCCATTACCGTCAAACCGCACTACCACCTCTTTCATTTTCAATCATGGAAGAAAAAAATCAAAGTCCAATTGCATTCGGAGCCAGTCCACACAGCAAAGGTGGACTCTTCAGGGCATGACAGCTCTCGTCACTGGTGGAACTCGCGGAATAGGGCGTGCCATTGTGGAGGAACTGACGGGGTTTGGAGCCAGAGTTCATACCTGTGCCAGGAACGAACACGATCTCACTGAATGCCTGAAGAAATGGAATGATTCGGGTTTTGAGGTCACTGGCTCAGTTTGTGATGTATCAGTTCCAAAGCAGAGGGAGGCGCTCATGGAGTCTGTTTCCTCTCTTTTCAACGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCGGTGACAGACTTCACTAGTACAGAGTTTTCCACTCTTATTGATACCAATTTGGGATCTGTCTTTCACATATGTCAACTTGCATATCCACATTTGAAAGCATCGGGAATGGGAAGTGTTGTGTTTGTTTCTTCTGTTTCTGGTTTTGTCTCGCTAAAGTCAATGTCTGTTCAAGGAGCAACAAAAGGGGCAATTAATCAACTTACAAGAAATCTAGCTTGTGAGTGGGCAAAAGACAATATAAGGAGTAATGCAGTGGCACCTTGGTACATCAGAACTTCAATGGTAGAGCAGGTGCTCAGCAACAAAGACTATCTGGAAGAAGTGTACTCTAGAACTCCTCTTAGGCGCCTAGGAGATCCAGCAGAAGTGTCTTCTGTTGTTGCGTTTCTTTGCCTACCAGCATCATCATACATCACTGGTCAGATTATTTGTATTGATGGAGGAATGTCCGTGAATGGTTTCTACCCAACAACGCAGTTCTAA 915 0.4393 MHMNSLINPTSYLPLPSNRTTTSFIFNHGRKKSKSNCIRSQSTQQRWTLQGMTALVTGGTRGIGRAIVEELTGFGARVHTCARNEHDLTECLKKWNDSGFEVTGSVCDVSVPKQREALMESVSSLFNGKLNILINNVGTNIRKPVTDFTSTEFSTLIDTNLGSVFHICQLAYPHLKASGMGSVVFVSSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIRTSMVEQVLSNKDYLEEVYSRTPLRRLGDPAEVSSVVAFLCLPASSYITGQIICIDGGMSVNGFYPTTQF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02166 304 PANTHER TROPINONE REDUCTASE 45 297 IPR045000 GO:0016491
Viun11g02166 304 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 189 IPR002347 -
Viun11g02166 304 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 139 IPR002347 -
Viun11g02166 304 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 201 220 IPR002347 -
Viun11g02166 304 FunFam Short-chain dehydrogenase reductase 40 298 - -
Viun11g02166 304 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 50 296 IPR036291 -
Viun11g02166 304 Gene3D - 32 299 - -
Viun11g02166 304 Pfam Enoyl-(Acyl carrier protein) reductase 60 294 - -
Viun11g02166 304 PRINTS Glucose/ribitol dehydrogenase family signature 257 277 IPR002347 -
Viun11g02166 304 PRINTS Glucose/ribitol dehydrogenase family signature 222 239 IPR002347 -
Viun11g02166 304 PRINTS Glucose/ribitol dehydrogenase family signature 53 70 IPR002347 -
Viun11g02166 304 PRINTS Glucose/ribitol dehydrogenase family signature 201 220 IPR002347 -
Viun11g02166 304 PRINTS Glucose/ribitol dehydrogenase family signature 128 139 IPR002347 -
Viun11g02166 304 PRINTS Glucose/ribitol dehydrogenase family signature 175 191 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02166 Viun-Chr11 36674479 36676649 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02166 45 298 Miscellaneous Gene Families AT2G29290 62.598 3.18e-120 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02166 K08081 - gmx:100799534 544.273