Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02164 ATGTATGTATATAGATATGCTATTGTGGAGGAGTTGGCACAGCTTGGAGCCACTGTGCACACTTGCTCTCGGAACGAAGCTGAACTCAATGAATCCTTGAACGAATGGAGCACAAAAGGATACAGAGTAACCGGTTCGGTCTGTGACGTGACCTCTCGCGTTAACAGAGAAGAGCTCATAGCCACAGTCTCATCTCAGTTCAATGGAAAACTCAATATCCTTGTAAACAATGTGGGAACAAACGTACAGAAACAGACCCTGGATTTAACAGCGGAAGATTTCGCATTTCTGATCAACACGAATCTTGAATCTGCTTTCCATTTAAGCCAGCTTGCATATCCTCTCCTAAAAGCTTCAGAAGCTGCAAGTATCATTTTCATATCCGCGATTGCTGGTGTTGTGGCTACAAACTTAGCATCCGTTATATATAGTGCAGCAAAAGGAGCAATAAACCAAGTGACAAAAAATTTGGCATGTGAATGGGCGAGAGACAACATAAGGACTAATTGTATTGCACCAGGGCCAATTAGAACCCCTCTTCTGGAAAAGCACTCTAAAGAGGACACAGTTATGAATGTTGTACTTTCTCAAACCCCTCTGGGACGGATCGGAGAGGCAGAGGAGGTGTCTTCGTTGGTGGCATTTCTGTGCTTGCCTGCAGCTTCTTACATTACAGGACAGACCATTTGTGTTGATGGCGGCTTCACTGTCAACGGCCTCCATATATTGTAA 732 0.4426 MYVYRYAIVEELAQLGATVHTCSRNEAELNESLNEWSTKGYRVTGSVCDVTSRVNREELIATVSSQFNGKLNILVNNVGTNVQKQTLDLTAEDFAFLINTNLESAFHLSQLAYPLLKASEAASIIFISAIAGVVATNLASVIYSAAKGAINQVTKNLACEWARDNIRTNCIAPGPIRTPLLEKHSKEDTVMNVVLSQTPLGRIGEAEEVSSLVAFLCLPAASYITGQTICVDGGFTVNGLHIL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02164 243 Pfam Enoyl-(Acyl carrier protein) reductase 6 236 - -
Viun11g02164 243 PRINTS Glucose/ribitol dehydrogenase family signature 143 162 IPR002347 -
Viun11g02164 243 PRINTS Glucose/ribitol dehydrogenase family signature 116 132 IPR002347 -
Viun11g02164 243 PRINTS Glucose/ribitol dehydrogenase family signature 199 219 IPR002347 -
Viun11g02164 243 PRINTS Glucose/ribitol dehydrogenase family signature 69 80 IPR002347 -
Viun11g02164 243 PRINTS Glucose/ribitol dehydrogenase family signature 164 181 IPR002347 -
Viun11g02164 243 FunFam Short-chain dehydrogenase reductase 6 240 - -
Viun11g02164 243 Gene3D - 6 239 - -
Viun11g02164 243 PANTHER TROPINONE REDUCTASE 5 239 IPR045000 GO:0016491
Viun11g02164 243 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 238 IPR036291 -
Viun11g02164 243 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 IPR002347 -
Viun11g02164 243 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 IPR002347 -
Viun11g02164 243 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 130 158 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02164 Viun-Chr11 36668747 36670331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02164 7 240 Miscellaneous Gene Families AT2G29150 61.538 1.65e-103 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02164 K08081 - gmx:100785449 381.719