Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02160 ATGTCGGGAGGTTTCTTTCGAGGCACATCTGCGGACCAGGACACTCGGTTTTCGAACAAGCAAGCGAAGCTGATGAAATCACAGAAGTTTGCACCGGAATTGGAGCATCTGGTGGACATGACGAAGGTGAATATGGAAGTAATTAAGCCTTGGGTCACCAGAAGGGTGACCGAGCTTCTTGGTTTCGAGGATGAAGTGCTTATTAACTTTATACACAGTCTTCTGGATGCTAAGGAAGTGAACGGGAAGGAAGTTCAAATACAAATTACTGGATTTATGGAAAAGAACACTGGAAAGTTCATGAAAGAACTTTGGACACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCTCAGCAATTCTTGGATGCCAAGGAAGAAGAACTTTTGAAGAAGAAGGCTGAAAATGATCGGATAACCAGTGAAATTCAGAGGAAAAAGGATAAGGAAGGTAGAGAAATTTTGGAAGAGAGGTTTAAGAAACTGGACGGTGGATTTGATTCCAAGGATAATGATACTGCATCAGCTCCAAATTCAAAGTTGAAGGATTCAGGATATGATCGAGATGGGAAGGAACCTGAAAAGAGGAATGGTGTCAGGGCAAGGAGCAGGCTTTCCAGGTCCCCACATTCACCTGCAGTTTCTACTTCACCTCATCGAGGCTCACCCTCAAGGTCAATGAGCAAATCATTTTCAAATTCCCGAAGTTATTCAGGTGGTAGACACAGGTCAAAGAGTATGTCTAGGTCTCCAGCAGCTCGAGGACGCTCTCTTTCTCATGAAAAGATTCATCATTCTCCACGAAGACGATCTATTTCTCCTCACAGGCATTCACCACGACGTTCTCCTCATAGGAGGTCACTTTATTTGAGGAGAAGATCCAGATCTCGCTCAAGTTATAGATCTCCTTCTCCTATACGACGTAGAATTCATTCCCCCGTGCATCGAAGTTCACCTTCTTATCGACGTAGAAGGTCACCTTCACCAATGCGTCGACGGAGGTCACCTTCACCGGTGCGACGACGAAGATCACCTTCTCCAATGCGACGGCGTTGGTCACCTTCTCCAGTGCGACGACGTAGGTCACCTTCTCCTGCAAGAAGACATAGATCTCCTTTGGTGCGACGTCGTAGATCACCGTCTCCTGGTCGTCGTTATAGATCGCCATCTCCTGGTCGTCGTCATAGATCACCATCCCTAGGGCACAAACATAGATCCCCATCACCTCTTGGAATGCGGAGATCACCAGGTCATAGACATAGATCACCATCACCTCTTGGACCACGAAGATCACCTTCACCTAGACGACGAAGATCACCTATCACTCGACATAGATCACCTTCTCCAGTGCGTCGGGTTCAACCAATCAGTGCTCGGAATAGATCAGAGTCTCCCATGCAATCCCCCTCCCCCATACAACGAAGGTATGGTAGTAGAACTCCTCCACACTCACCATCCCCATTACAACGCAGATCACCTATTCCTAGCAAGAATAGATCTCCAAGTATCTCCCCTCAGAAGTCTCCTCGAGATGAATGGAGTTCTCAGTCTCCAATACAACATGTATCAACCTCTCCAAATAGGAAAAGTTCTCAAAGACAACAAAGAAGTCCCATGCAGTCTTCTATAAAGAGAGTCAGGAGTAGTCCTGTGGGGTCTGTACGAAGAGGCAAAGCTTTGAACTATAAATCACAAGAGTCAATGTCCACTCCAGAGAAATCTCCAAATCGATCTGTATCTGCAGAAGCAAGAAGTGAGACCAGCAGTGAAGGTAGAAGTCCTCATGGGAACACGATGAAACAAAGAGAAAAGTTATCCAATAAAAGAAGCTTGAGTCCTTTAAAGAAACAAAGAACCCAGAAACCTAGCCATGAAAGCCCACAGACTAGAGATGAAGCAGAGGAAACATACTATTCCAGAGAAAGGAGAGATCCTAAAGTAAACTTATCACAAAAGATAGTAAGACACTCCCCAGCTAGTACGAGAAAAGGTTCACCTGCAAAATATGGTCATGAGGATGAGTTCTCTCCTGAAAGGGATGCAGGTCATCCAGCTTCTGAGCATAACAATGATTGGAATAAGAAAGGCCGGGAGATAAAACGGGATAAGTCTTCTGGAAAAGGCAATGAATTTCTTTCTCAACAAAAGCCCTCAGTTAACAAGGAAACTTTTTCAAGGGAGAAGCCTCGTGAATCATATGCTGTAGATATTAAAAAATCAGATGACAAGGACCAATCCCGTTCAAATTATTCCAAAAGTAGTGATCGGCACCACAAATCCGAAGCCACTCCAGAATTAGGTGGAAGAGATGATATTGGCAATCAGAGTGCCTCACATGATTCTGTTTCTGAGGAAAGTGGTAAACATAGACGAGAGGGAAAGGACAGGAAAAGGCATAAAAGGTCTGAGAAAAAATATGCGTCTTCTGATGAGGATTATAGTTATGATTCTGAGGTAGAGGACAGGAAAGAGGCTAAGAAGAGGAGAAAGGAGGAGAAGAAGTTGCGGAAAGAGGATAAGCGTCGAAGACGGGAAGAGAAGCGTCGCAGAAGGGAAGAACGGCGTGCAGAGAAGCTGAAGCTGAAGAGTAAAACAGACAATATTTCAGATGACGAGGAAGCTGAACGAGATTATCATCAAAGTGATGGTGAAGAGACACCATCTGAGCAAAAGAAGCTTGAGATTGAATTGCGGAATAAGGCTCTTGAATCCCTCAAAGCAAAGAGGGGCATGAATAATTAA 2745 0.447 MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWVTRRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELLKKKAENDRITSEIQRKKDKEGREILEERFKKLDGGFDSKDNDTASAPNSKLKDSGYDRDGKEPEKRNGVRARSRLSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYSGGRHRSKSMSRSPAARGRSLSHEKIHHSPRRRSISPHRHSPRRSPHRRSLYLRRRSRSRSSYRSPSPIRRRIHSPVHRSSPSYRRRRSPSPMRRRRSPSPVRRRRSPSPMRRRWSPSPVRRRRSPSPARRHRSPLVRRRRSPSPGRRYRSPSPGRRHRSPSLGHKHRSPSPLGMRRSPGHRHRSPSPLGPRRSPSPRRRRSPITRHRSPSPVRRVQPISARNRSESPMQSPSPIQRRYGSRTPPHSPSPLQRRSPIPSKNRSPSISPQKSPRDEWSSQSPIQHVSTSPNRKSSQRQQRSPMQSSIKRVRSSPVGSVRRGKALNYKSQESMSTPEKSPNRSVSAEARSETSSEGRSPHGNTMKQREKLSNKRSLSPLKKQRTQKPSHESPQTRDEAEETYYSRERRDPKVNLSQKIVRHSPASTRKGSPAKYGHEDEFSPERDAGHPASEHNNDWNKKGREIKRDKSSGKGNEFLSQQKPSVNKETFSREKPRESYAVDIKKSDDKDQSRSNYSKSSDRHHKSEATPELGGRDDIGNQSASHDSVSEESGKHRREGKDRKRHKRSEKKYASSDEDYSYDSEVEDRKEAKKRRKEEKKLRKEDKRRRREEKRRRREERRAEKLKLKSKTDNISDDEEAERDYHQSDGEETPSEQKKLEIELRNKALESLKAKRGMNN 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02160 914 Pfam PWI domain 46 115 IPR002483 GO:0006397
Viun11g02160 914 MobiDBLite consensus disorder prediction 415 446 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 209 254 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 834 850 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 561 596 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 805 833 - -
Viun11g02160 914 Coils Coil 123 150 - -
Viun11g02160 914 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Viun11g02160 914 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 388 910 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 667 708 - -
Viun11g02160 914 Coils Coil 823 865 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 722 767 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 262 403 - -
Viun11g02160 914 SUPERFAMILY PWI domain 25 132 IPR036483 GO:0006397
Viun11g02160 914 MobiDBLite consensus disorder prediction 619 651 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 851 897 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 454 549 - -
Viun11g02160 914 Gene3D PWI domain 33 125 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 183 202 - -
Viun11g02160 914 SMART pwi_2 40 114 IPR002483 GO:0006397
Viun11g02160 914 MobiDBLite consensus disorder prediction 597 611 - -
Viun11g02160 914 MobiDBLite consensus disorder prediction 164 897 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02160 K13171 - gmx:100810238 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02160 11 36646739 36652992 Viun11g02160 11 36646739 36652992 ECH