Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02111 ATGGCTCCTTCACTGTTCCTATGCACATTCTTCATCCTCGCTGTCACCACCCTTACCTCACCCACAGGTGCCCTTATCCTAACCTTAGTTAACAACTGCAACTACACCGTGTGGCCAGCCATTCAACCCAACGCCGGCCACCCAGTCCTCGCCGGCGGCGGCTTTACCCTCAACACCCTCACCCACCAGTCCATCCCCGTCCCGGATGTCCACTGGTCAGGCCGGGTCTGGGCCCGTACCGGCTGCACCCACTCCGGCGCCGGCTTCTCCTGCGCCAGCGGTGACTGCGGCGGCCGTCTCCAGTGCAACGGCGCCGGCGGTTCTCCTCCCGCCTCCCTGGCGCAAGTGGAGGTCCACCACGGAAACGGCGATTCCGTCTCCTACGGCGTGAGCCTCGTCGACGGGTTCAACGTCCCCATGACGGTGACCCCACACGAGGGCAAAGGCGTGTGCCCGGTGGTTGGTTGCCGCGCCGACTTGCTTGCCACGTGTCCCCCCGTGCTGCAGCACCGCGTCCCGGCCGTTCACGGGCCCGTTGTCGCGTGCAAGAGCGGGTGCGAGGCTTTCCACACCGACGAGCTCTGCTGTAGGAACCACTTCAACAGCCCCCACACGTGCCGTGAGTCCGTGTACTCCACCTTCTTCAAGCACGCGTGCCCCAACACTTTCACCTACGCCCACGACAACCCCTCCCTCATGCATCAGTGTTCCTCCCCGCACGAGCTCAAGGTTATCTTTTGCCACTAA 747 0.6386 MAPSLFLCTFFILAVTTLTSPTGALILTLVNNCNYTVWPAIQPNAGHPVLAGGGFTLNTLTHQSIPVPDVHWSGRVWARTGCTHSGAGFSCASGDCGGRLQCNGAGGSPPASLAQVEVHHGNGDSVSYGVSLVDGFNVPMTVTPHEGKGVCPVVGCRADLLATCPPVLQHRVPAVHGPVVACKSGCEAFHTDELCCRNHFNSPHTCRESVYSTFFKHACPNTFTYAHDNPSLMHQCSSPHELKVIFCH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02111 248 FunFam Osmotin-like protein 26 247 - -
Viun11g02111 248 CDD TLP-PA 26 247 - -
Viun11g02111 248 PANTHER OS03G0233200 PROTEIN 11 247 IPR001938 -
Viun11g02111 248 Pfam Thaumatin family 31 247 IPR001938 -
Viun11g02111 248 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Viun11g02111 248 SMART tha2 27 248 IPR001938 -
Viun11g02111 248 PIRSF PR5 1 248 IPR001938 -
Viun11g02111 248 Gene3D Thaumatin 26 247 IPR037176 -
Viun11g02111 248 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Viun11g02111 248 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Viun11g02111 248 PRINTS Pathogenesis-related protein signature 238 247 IPR001938 -
Viun11g02111 248 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Viun11g02111 248 ProSiteProfiles Thaumatin family profile. 24 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02111 Viun-Chr11 36341964 36343163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02111 1 247 Receptor kinase-like Gene Family AT5G38280 35.458 1.04e-44 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02111 - - gmx:100814312 470.314