Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02101 ATGGCGTCGAATTCTTCTGATGGAGATTCTAGTAAATCACCGAAGCAGCCTCCCCTGCCATCTCCCTTGCGTTTCTCCAAATTCTATCAGTCTAACATGAGAATCTTGATCACGGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGTCGATAACTACTTCACTGGATCAAAGGATAATCTCAAAAAATGGACGGGTCATCCCAGATTTGAGCTTATCCGTCATGATATCACTGAACCTTTGATAATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCATCTCCTATTTTCTACAAATATAATGCTGTGAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGCGCAAGGATTCTACTTACATCAACATCGGAGGTATATGGGGATCCTCTTGAGCATCCCCAAAATGAAAGCTATTGGGGAAATGTGAACCCTATTGGAGTTCGTAGTTGTTATGACGAGGGAAAGCGTGTAGCTGAGACTTTAATGTTTGACTATCATAGGCAGCATGGCTTAGAAATACGTGTTGCAAGAATCTTTAACACGTATGGGCCGCGCATGAATATTGACGATGGGCGTGTTGTCAGCAACTTCATTGCTCAAGCACTTCGTGGTGAACCCTTGACGGTCCAGTCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTCGATGGCCTTATCCGTCTCATGGCAGGATCCGACACGGGGCCAATCAACCTCGGAAATCCAGGTGAATTTACAGTGCTTGAACTTGCTGAGACAGTTAAGGAGCTAGTTAATCCAGATGTAGAGATAAAGATGGTGGAAAACACTCCTGATGATCCCCGACAGAGAAAACCAGACATAACAAAAGCAAAGGAGTTACTTCAGTGGGAACCAAAGTTTCAGCTGCGAGATGGTCTGCCTTTAATGGAAGAGGATTTCCGCTTGAGGCTTGGAGTTGTCAAAAATAATTAA 1041 0.438 MASNSSDGDSSKSPKQPPLPSPLRFSKFYQSNMRILITGGAGFIGSHLVDRLMENEKNEVIVVDNYFTGSKDNLKKWTGHPRFELIRHDITEPLIIEVDQIYHLACPASPIFYKYNAVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQNESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDLVDGLIRLMAGSDTGPINLGNPGEFTVLELAETVKELVNPDVEIKMVENTPDDPRQRKPDITKAKELLQWEPKFQLRDGLPLMEEDFRLRLGVVKNN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02101 346 Pfam GDP-mannose 4,6 dehydratase 36 330 IPR016040 -
Viun11g02101 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 21 341 IPR044516 GO:0042732|GO:0048040|GO:0070403
Viun11g02101 346 CDD UGD_SDR_e 33 337 - -
Viun11g02101 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
Viun11g02101 346 MobiDBLite consensus disorder prediction 1 22 - -
Viun11g02101 346 Gene3D - 30 154 - -
Viun11g02101 346 Gene3D - 155 340 - -
Viun11g02101 346 FunFam UDP-glucuronic acid decarboxylase 6 32 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02101 Viun-Chr11 36297838 36302595 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02101 30 345 Miscellaneous Gene Families AT1G02000 23.932 3.01e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02101 K08678 - gmx:100818771 638.262