Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02095 ATGGCACCAAAGGCAGAGAAGAAGCCAGCGGAGAAGAAGCCTGCAGAAGAGAAGAAGTCCACCGTAGGAGACAAGGCTCCGGCAGAGAAGAAGCCAAAGGCAGGAAAGAAGCTTCCTAAGGAGGGAGGAGCTGGTGGTGATAAGAAAAAGAAGAGAAACAAGAAGAGTGTGGAGACATACAAGATCTACATCTTCAAGGTTCTGAAGCAGGTTCACCCGGACATTGGTATCTCCAGCAAGGCCATGGGCATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTTGCCCAGGAATCTTCTAGACTTGCCCGCTACAACAAGAAACCCACCATCACTTCAAGGGAAATCCAGACTGCGGTCAGACTTGTGTTGCCTGGAGAATTAGCCAAACATGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGAGAGAAGAAGCCAGCGGAGAAGAAGCCTGCAGAGGAGAAGAAGTCCACTGTAGGAGACAAGGCTCTGGCGGAGAAGAAGCCGAAGGCAGGAAAGAAGCTTCCGAAGGAAGGAGGCGCTGGTGGCGATAAGAAGAAGAAGAGAAACAAGAAGAGTGTGGAGACGTACAAGATCTACATCTTCAAGGTTCTGAAGCAGGTTCACCCCGACATTGGTATCTCCAGCAAGGCCATGGGCATCATGAACAGTTTCATCAACGACATCTTTGAGAAGCTTGCCCAGGAATCTTCTAGACTTGCCCGTTACAACAAGAAACCCACCATCACTTCAAGGGAAATCCAGACTGCTGTCAGACTTGTGTTGCCTGGAGAATTGGCCAAACATGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGTTCTTGA 867 0.4925 MAPKAEKKPAEKKPAEEKKSTVGDKAPAEKKPKAGKKLPKEGGAGGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTREKKPAEKKPAEEKKSTVGDKALAEKKPKAGKKLPKEGGAGGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02095 288 MobiDBLite consensus disorder prediction 139 193 - -
Viun11g02095 288 SUPERFAMILY Histone-fold 180 288 IPR009072 GO:0046982
Viun11g02095 288 SUPERFAMILY Histone-fold 39 147 IPR009072 GO:0046982
Viun11g02095 288 ProSitePatterns Histone H2B signature. 115 137 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 MobiDBLite consensus disorder prediction 1 53 - -
Viun11g02095 288 PRINTS Histone H2B signature 118 131 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 PRINTS Histone H2B signature 79 99 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 PRINTS Histone H2B signature 60 78 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 PRINTS Histone H2B signature 101 118 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 PRINTS Histone H2B signature 131 144 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 ProSitePatterns Histone H2B signature. 256 278 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 PANTHER HISTONE H2B 152 287 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 Pfam Core histone H2A/H2B/H3/H4 4 123 IPR007125 GO:0003677
Viun11g02095 288 Pfam Core histone H2A/H2B/H3/H4 148 264 IPR007125 GO:0003677
Viun11g02095 288 Gene3D Histone, subunit A 23 147 IPR009072 GO:0046982
Viun11g02095 288 Gene3D Histone, subunit A 148 288 IPR009072 GO:0046982
Viun11g02095 288 FunFam Histone H2B 147 288 - -
Viun11g02095 288 SMART h2b3 191 287 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 SMART h2b3 50 146 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02095 288 MobiDBLite consensus disorder prediction 141 193 - -
Viun11g02095 288 FunFam Histone H2B 15 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02095 Viun-Chr11 36277329 36283721 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02095 K11252 - gmx:100776374 446.817