Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02094 ATGGCACCAAAGGCAGAGAAGAAGCCAGCGGAGAAGAAGCCTGCAGAGGAGAAGAAGTCCACCGTAGGTGACAAGGCTCCGGCGGAGAAGAAGCCGAAGGCAGGAAAGAAGCTTCCCAAGGAAGGAGGCGCTGGTGGCGATAAGAAGAAGAAGAGAAACAAGAAGAGTGTGGAGACATACAAGATCTACATCTTCAAGGTTCTGAAGCAGGTTCACCCCGACATTGGTATCTCCAGCAAGGCCATGGGTATCATGAACAGTTTCATCAATGACATCTTTGAGAAGCTTGCCCAGGAATCTTCTAGACTTGCCCGCTACAACAAGAAACCCACCATCACTTCAAGGGAAATCCAGACTGCGGTCAGACTTGTGTTGCCTGGAGAATTGGCCAAACATGCTGTCTCTGAGGGTACCAAGGCTGTTACCAAGTTCACTAGTTCTTGA 444 0.4977 MAPKAEKKPAEKKPAEEKKSTVGDKAPAEKKPKAGKKLPKEGGAGGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02094 147 MobiDBLite consensus disorder prediction 1 54 - -
Viun11g02094 147 PRINTS Histone H2B signature 60 78 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02094 147 PRINTS Histone H2B signature 131 144 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02094 147 PRINTS Histone H2B signature 118 131 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02094 147 PRINTS Histone H2B signature 101 118 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02094 147 PRINTS Histone H2B signature 79 99 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02094 147 Pfam Core histone H2A/H2B/H3/H4 4 123 IPR007125 GO:0003677
Viun11g02094 147 PANTHER HISTONE H2B 11 146 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02094 147 SUPERFAMILY Histone-fold 39 147 IPR009072 GO:0046982
Viun11g02094 147 ProSitePatterns Histone H2B signature. 115 137 IPR000558 GO:0000786|GO:0003677|GO:0030527
Viun11g02094 147 Gene3D Histone, subunit A 23 147 IPR009072 GO:0046982
Viun11g02094 147 FunFam Histone H2B 16 147 - -
Viun11g02094 147 SMART h2b3 50 146 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02094 Viun-Chr11 36268759 36269498 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02094 K11252 - vum:124842194 229.95