Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02077 ATGGCACCCTTGAAATCGCTGGAGAAAGAGTACCCTCTCATTGATTCCAATTTTCAAAGCTTCTGTGCCTCACACGCCATTTTCTCTGTTCAAGATTTCCTTCTTCATGATATCGACGCATTAATTGCCTTGGCGGATAATCACTGTGCTTCACAGACACTCAAGCAAGGAATCGACCAGCTTCTCTCAATAATAGATGCTCGTCATCCACCGTTGCTAAATGGTTTGCAGCTCTTGGAAGAGGCTCAGCGGAATAAACATGTTTTGTCTACTGGATGTGAAGGGATTGATGCATTGCTCGGAGGTGGATTACGAGAAGGACAATTAACTGAACTTGTTGGGCCATCCGCATCAGGAAAGACACAGGCATGCCTACTGTCTGCTTCAACTGTTGCAAAACATAAGGGTTCCGTTATATACTTAGATACAGGAAACTCCTTTTCACCTCAGCGTATTGCACGTTTTGTTGGCCAGTCTTCTGGTTATGATTCGGACAATCAGGCTGAGCATATACTCAAAAAGGTATTGGACAGGATAATTTGTCACTCAGTGTTTGACATCTATCAGATGCTTGATGTGCTACGTCAACTGAAGATTAATTTAAGATCTGAGACTGTGAAATCAAATCAGCACGTTCGATTGCTTATTGTTGATTCAATCTCTTCACTGATTACCCCCATCCTTGGGGGCCGTGGTCCTCAGGGGCATGCTTTAATGATATCTGCTGGGTATTTACTGAAGAAGTTAGCTCATGAGCATAATATTGCTGTTTTGGTAACGAATCATGTGGTGCGTGGGGAAGATGGTATTTCCAAACCAGCTCTTGGAGAGAGTTGGAAGAGTGTCCCACATGTACGGCTTTTGTTTTCCCAAGATTGTGGAAGCAATGTGTGCAATATTTCAATGCTAAAACATCCATCCATGGTATGCCATTCAATCAGAAAATGTCTTTATAGTGTCGTATGTGTTAGTTAA 975 0.4256 MAPLKSLEKEYPLIDSNFQSFCASHAIFSVQDFLLHDIDALIALADNHCASQTLKQGIDQLLSIIDARHPPLLNGLQLLEEAQRNKHVLSTGCEGIDALLGGGLREGQLTELVGPSASGKTQACLLSASTVAKHKGSVIYLDTGNSFSPQRIARFVGQSSGYDSDNQAEHILKKVLDRIICHSVFDIYQMLDVLRQLKINLRSETVKSNQHVRLLIVDSISSLITPILGGRGPQGHALMISAGYLLKKLAHEHNIAVLVTNHVVRGEDGISKPALGESWKSVPHVRLLFSQDCGSNVCNISMLKHPSMVCHSIRKCLYSVVCVS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02077 324 CDD Rad51D 101 305 IPR047323 -
Viun11g02077 324 FunFam DNA repair protein RAD51 4 74 319 - -
Viun11g02077 324 ProSiteProfiles RecA family profile 1. 85 263 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Viun11g02077 324 Pfam Rad51 83 298 IPR013632 -
Viun11g02077 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 296 IPR027417 -
Viun11g02077 324 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 4 1 313 - -
Viun11g02077 324 Gene3D - 72 320 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02077 Viun-Chr11 36184880 36188720 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02077 K10871 - gmx:100780427 556.214