Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02065 ATGGAGTCACCGAGTGTGCAGGCGCAAGCTGCATCAGCAAGCACACCAAGGAAAAAAATGACAAAACAATTGACAGGTAAAAGGGATGATACCCCTTTGCATTCTGCAGCAAGAGCAGGGAATCTGAGCGTTCTGAAAGACACGGTTAGTGGGTGTGAAGGGGGTGAACTGCGTGCGTTGATGACAAAGCAGAACCATGCTGGAGAAACGGTGCTTTATGTTGCTGCTGAATATGGTTATGTTGATATGGTTAGGGAGATGATTCAATATTATGATCTTGCTGGTGCTGGAATTAAGGCAAGGAATGGTTTTGATGCACTCCACATTGCTGCCAAACAAGGCGATTTAGATATTGTGAAGATCCTAATGGAGGCTCATTCTGAGTTGTCAATGACAGTGGATCCATCCAACACCACAGCCCTGCACACTGCTGCATTACAAGGGCACATTGAGATTGTAAAATTTCTATTGGAAGCAGGTAGTAGTCTGGCAACTATTGCTAGAAGTAATGGAAAAACGGCTTTGCATTCTGCAGCAAGAAATGGACATGTAGAGGTTGTGAAAGCACTTATGGAGAAGGAGCCTGCAGTTGCAACGCGGACCGATAAGAAGGGACAGACAGCACTTCACATGGCAGTGAAGGGACAGAATGTTGAGGTGGTGGAGGAGTTGATAAAAGCTGATCCCTCAACAATAAACATGGTTGATAACAAGGGTAACACGCCATTGCACATAGCAACCAGGAAGGGCAGAGCTCAGATTGTTAAGTTGGTTCTTGGGCAGACAGAAACAGATTCATTGGCAGTAAACAAGTCTGGCGAAACTGCACTAGACACTGCTGAAAAAACTGGGAACTCTGAAGTTAAAGACATTCTACTGGAATACGGTGTTCGAAGTGCGAAAGCCTTAAAGACTCAGCCGGTAACAGCCACAGCCCGTGAGTTAAAACAAACAGTGAGTGACATAAAACATGAAGTCCACTACCAGTTGGAACACACTCGCCAAACTAGAAGAGGTGTTCAAGGGATAGCCAAACGTATCAACAAAATGCATGCTGAAGGACTGAACAATGCAATAAACTCCACCACTGTGGTTGCAGTGCTCATTGCCACAGTTGCATTTGCAGCTATTTTCACAGTCCCTGGGCAATTTGCTGATGATCCAAAAGACATTCCTCCAGGTTCAGGGATGACCATTGGTGAAGCAAACATAGCCCCACAAGCTGCATTTCTCATTTTTTTTGTGTTTGATTCCATTGCCCTCTTCATTTCTCTGGCTGTGGTGGTGGTGCAGACCTCGGTTGTGATCATAGAAAGCAAAGCAAAGAAGCAGATGATGGCCATCATTAACAAGCTCATGTGGTTGGCTTGTGTGCTTATTTCTGTGGCCTTCTTGGCACTGTCTTTTGTAGTGGTGGGGAAGGATCAGAAGTGGCTTGCAATTGGAGTCACTATCATAGGAACAACTATAATGGCCACAACTTTGGGCACCATGTGTTACTGGGTTATTAGGCATCGCATTGAGGCCTCAAATTTAAGGAGCATTCGGAAATCCTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGTATCAGTTATGTCAGATTCTGAGCTACTAAACAATGACCGCAAGATACTTTATGCCATATAG 1647 0.4487 MESPSVQAQAASASTPRKKMTKQLTGKRDDTPLHSAARAGNLSVLKDTVSGCEGGELRALMTKQNHAGETVLYVAAEYGYVDMVREMIQYYDLAGAGIKARNGFDALHIAAKQGDLDIVKILMEAHSELSMTVDPSNTTALHTAALQGHIEIVKFLLEAGSSLATIARSNGKTALHSAARNGHVEVVKALMEKEPAVATRTDKKGQTALHMAVKGQNVEVVEELIKADPSTINMVDNKGNTPLHIATRKGRAQIVKLVLGQTETDSLAVNKSGETALDTAEKTGNSEVKDILLEYGVRSAKALKTQPVTATARELKQTVSDIKHEVHYQLEHTRQTRRGVQGIAKRINKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFADDPKDIPPGSGMTIGEANIAPQAAFLIFFVFDSIALFISLAVVVVQTSVVIIESKAKKQMMAIINKLMWLACVLISVAFLALSFVVVGKDQKWLAIGVTIIGTTIMATTLGTMCYWVIRHRIEASNLRSIRKSSMGSRSRSFSVSVMSDSELLNNDRKILYAI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02065 548 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 7 528 - -
Viun11g02065 548 MobiDBLite consensus disorder prediction 1 20 - -
Viun11g02065 548 Gene3D - 166 339 IPR036770 -
Viun11g02065 548 SMART ANK_2a 67 96 IPR002110 GO:0005515
Viun11g02065 548 SMART ANK_2a 28 59 IPR002110 GO:0005515
Viun11g02065 548 SMART ANK_2a 170 199 IPR002110 GO:0005515
Viun11g02065 548 SMART ANK_2a 102 131 IPR002110 GO:0005515
Viun11g02065 548 SMART ANK_2a 272 302 IPR002110 GO:0005515
Viun11g02065 548 SMART ANK_2a 136 165 IPR002110 GO:0005515
Viun11g02065 548 SMART ANK_2a 238 269 IPR002110 GO:0005515
Viun11g02065 548 SMART ANK_2a 204 234 IPR002110 GO:0005515
Viun11g02065 548 SUPERFAMILY Ankyrin repeat 32 297 IPR036770 -
Viun11g02065 548 Pfam Domain of unknown function 353 471 IPR026961 -
Viun11g02065 548 ProSiteProfiles Ankyrin repeat region circular profile. 136 163 - -
Viun11g02065 548 ProSiteProfiles Ankyrin repeat profile. 136 168 IPR002110 GO:0005515
Viun11g02065 548 Gene3D - 5 165 IPR036770 -
Viun11g02065 548 ProSiteProfiles Ankyrin repeat profile. 204 226 IPR002110 GO:0005515
Viun11g02065 548 ProSiteProfiles Ankyrin repeat profile. 170 202 IPR002110 GO:0005515
Viun11g02065 548 ProSiteProfiles Ankyrin repeat profile. 238 259 IPR002110 GO:0005515
Viun11g02065 548 Pfam Ankyrin repeats (3 copies) 236 297 IPR002110 GO:0005515
Viun11g02065 548 Pfam Ankyrin repeats (3 copies) 170 229 IPR002110 GO:0005515
Viun11g02065 548 Pfam Ankyrin repeats (3 copies) 88 163 IPR002110 GO:0005515
Viun11g02065 548 MobiDBLite consensus disorder prediction 1 33 - -
Viun11g02065 548 ProSiteProfiles Ankyrin repeat region circular profile. 102 130 - -
Viun11g02065 548 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Viun11g02065 548 ProSiteProfiles Ankyrin repeat region circular profile. 204 226 - -
Viun11g02065 548 ProSiteProfiles Ankyrin repeat region circular profile. 238 259 - -
Viun11g02065 548 ProSiteProfiles Ankyrin repeat region circular profile. 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02065 Viun-Chr11 36076219 36079249 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02065 11 548 Miscellaneous Gene Families AT1G07710 71.561 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02065 - - gmx:100808971 931.784