Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02017 ATGGCAGCGTCGCGAATCGTAGCCCACCCTCCGCCCTATCTCCACCGCCAATGTTCGCCGTCAGACGCCGTGCCGTTCCTCAACCTTACGCTTCACGCAAAACGGTACCGTAACCTCAGCATTCGCGCTTCTCTTCACGAGGGAAAGCAGAAGAAGAACGATCTCGCTGATAAACCTCACTCAGTCGAATTGCGAACCAGCCCCAACGACGTCGTTTCCCGCGATCCGCTCATTCTTCCGCGACCTTTATCTGCTTCAGTTTCTGACGGTTCTGGACTTCGTGTTGCATATCAGGGGGTTCATGGTGCGTACAGTGAATCAGCAGCACATAAGGCCTACCCAAATTGTGAAGCTGTGCCGTGTGAACAATTTGAAACCGCTTTTGATGCTGTTGAAAGGTGGATTGTGGACAGAGCAGTTTTGCCAATTGAGAATTCTTTAGGAGGGAGTATCCACAGAAATTATGACCTTTTACTTCGGCATAGTTTACATATAGTAGGAGAAGTGAAATATGCTGTTCGTCACTGTTTGATGGCAAACCATGGTGTTAAACTTGAGGATTTGAACCGGGTTCTAAGTCATCCACAGGCTCTTGCTCAATGTGAGAACACACTGACAAAATTGGGATTGGTACGAGAAGCAGTTGATGATACAGCTGGTGCCGCTAAGCAAGTTGCCTTGCTCGGACTACAAGATGCAGGAGCAGTCGCTAGTTATTCTGCTGCAAAGATCTATGGCTTGAATATACTTGCTGAAGACATTCAGGATGATAGTGATAATGTCACTCGATTTTTAATGTTAGCCCGAGAACCTATAATTCCAGGCACTGATAGGCCATTTAAGACAAGCATAGTTTTTTCTTTAGAAGAAGGTCCTGGGGTTCTTTTCAAGGCTCTTGCTGTTTTTGCATTGCGTCAGGTTAACCTTACAAAGATTGAAAGCCGTCCTCTGCGAAACCAACCTCTGCGAGCAGCAGATGATAGCAGCAATTCCAAGTACTTTGATTATCTTTTTTATGTTGATTTTGAAGAATCAATGGCTAATCAGAATGCACAAAATGCCCTAAGGCATCTAAAGGAGTTTGCTACATTCTTGCGAGTGCTAGGGAGCTATCCAGTGGACACTAGCTCGACGTGA 1137 0.46 MAASRIVAHPPPYLHRQCSPSDAVPFLNLTLHAKRYRNLSIRASLHEGKQKKNDLADKPHSVELRTSPNDVVSRDPLILPRPLSASVSDGSGLRVAYQGVHGAYSESAAHKAYPNCEAVPCEQFETAFDAVERWIVDRAVLPIENSLGGSIHRNYDLLLRHSLHIVGEVKYAVRHCLMANHGVKLEDLNRVLSHPQALAQCENTLTKLGLVREAVDDTAGAAKQVALLGLQDAGAVASYSAAKIYGLNILAEDIQDDSDNVTRFLMLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQVNLTKIESRPLRNQPLRAADDSSNSKYFDYLFYVDFEESMANQNAQNALRHLKEFATFLRVLGSYPVDTSST 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02017 378 FunFam Arogenate dehydratase 89 176 - -
Viun11g02017 378 ProSitePatterns Prephenate dehydratase signature 1. 245 267 IPR018528 GO:0004664|GO:0009094
Viun11g02017 378 ProSitePatterns Prephenate dehydratase signature 2. 309 316 IPR018528 GO:0004664|GO:0009094
Viun11g02017 378 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 53 377 - -
Viun11g02017 378 Pfam Prephenate dehydratase 95 271 IPR001086 GO:0004664|GO:0009094
Viun11g02017 378 CDD PBP2_Ct-PDT_like 94 271 - -
Viun11g02017 378 Gene3D - 276 375 - -
Viun11g02017 378 SUPERFAMILY Periplasmic binding protein-like II 94 275 - -
Viun11g02017 378 Gene3D - 178 257 - -
Viun11g02017 378 MobiDBLite consensus disorder prediction 47 67 - -
Viun11g02017 378 FunFam Arogenate dehydratase 177 257 - -
Viun11g02017 378 CDD ACT_CM-PDT 281 372 - -
Viun11g02017 378 ProSiteProfiles ACT domain profile. 283 372 IPR002912 -
Viun11g02017 378 MobiDBLite consensus disorder prediction 47 64 - -
Viun11g02017 378 ProSiteProfiles Prephenate dehydratase domain profile. 94 269 IPR001086 GO:0004664|GO:0009094
Viun11g02017 378 FunFam Arogenate dehydratase 276 375 - -
Viun11g02017 378 SUPERFAMILY ACT-like 264 373 IPR045865 -
Viun11g02017 378 Gene3D - 89 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02017 Viun-Chr11 35729803 35734423 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02017 K05359 - gmx:100787387 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02017 11 35729803 35734423 Viun11g02017 11 35729803 35734423 ECH