Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02002 ATGGAGTGGGTGAAGATGAAGGAGTGCGCGAGAGAGTTCATGGTTGGGGTGGCGGAGATGACGGTGGAGTTCGGAAAAGGTTGCAGAGACATAGTCAAGCAGAGTTTGGTCAATGAAGATTCATTTATCGTCAAAAACTTAGGGAGAGATTCCTACATTGGAAAAAGACTCAGAGGACCCTGTGCCAAGCTTTTCGCCAAATTGAGCTTCTTCAACGAGTATTTGCCAGAGGATAAGGATCCTCTTCACGCTTGGTCCGTCATTTTCTTCGTTTTCCTTCTCGCGTTCTTAGCTTTGTATGTGAATTTTGAGCGTGATCCGGACGCGCCGCCGGTGAAGCAGGTGTTTCTGCATCCTCCTAGTGCTTCTCGCGTTGTGCTTCCTGACGGACGGTACATGGCGTATAAGGAGCAAGGTGTTTCGTCTCAGAAAGCTAGGTTTTCCATCATTGCTCCTCATAGTTTTCTTTCCTCCCGGCTTGCAGGGATTCCTGGAGTTAAAGATTCTCTGCTGGAAGAGTTTGGTATTCGTTTGTTGACGTATGATCTTCCTGGTTTTGGTGAGAGTGATCCTCACCCCAACCGGAACCTGGAATCCTCGGCAACAGATATGGCATGTTTAGCGGATGCTCTCGGTGTGAACAAGTTTTGGGTTGTTGGTTATTCAAGCGGGAGTATGCATGCTTGGGCTGCACTTAGATACATTCCTGATAGGCTTGCTGGTGCGGCCATGTTTGCTCCCATGGTGAACCCATATGATCCTATGATGACGAAGGAAGAGAGACGAAGAACTTGGAACAAATGGACACGGAGAAGAAAATTCTTGTACTTCTTAGCCCGGAGGTTTCCTAGATTTCTAGCCTTCTTCTATCAGCGAAGCTTCTTGTCTGGAAAGCATGGACAGATTGATAAGTGGCTGTCGTTATCTCTGGGAAGGAGGGATAAAGCACTGATGGAAGATCCAATTTATGAGGAATTCTGGCAAAGGGATGTGGAGGAATCAACCAGACAAAGAAATGTGAAACCCTTTGTGGAGGAAGCTGCTTTGCAGGTCTCAAATTGGGGTTTCAGCCTTTCGGACCTCAAGTTGCAGAAGAGGAAACCGAGTAGTGAGTTACTCAGTTGGCTGAAATCAATGTTCACTGAAACTCAGGAATATATAGGATTTCTTGGCCCTATACATATATGGCAATGCAAATGTTAA 1203 0.4638 MEWVKMKECAREFMVGVAEMTVEFGKGCRDIVKQSLVNEDSFIVKNLGRDSYIGKRLRGPCAKLFAKLSFFNEYLPEDKDPLHAWSVIFFVFLLAFLALYVNFERDPDAPPVKQVFLHPPSASRVVLPDGRYMAYKEQGVSSQKARFSIIAPHSFLSSRLAGIPGVKDSLLEEFGIRLLTYDLPGFGESDPHPNRNLESSATDMACLADALGVNKFWVVGYSSGSMHAWAALRYIPDRLAGAAMFAPMVNPYDPMMTKEERRRTWNKWTRRRKFLYFLARRFPRFLAFFYQRSFLSGKHGQIDKWLSLSLGRRDKALMEDPIYEEFWQRDVEESTRQRNVKPFVEEAALQVSNWGFSLSDLKLQKRKPSSELLSWLKSMFTETQEYIGFLGPIHIWQCKC 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02002 400 SUPERFAMILY alpha/beta-Hydrolases 119 306 IPR029058 -
Viun11g02002 400 Gene3D alpha/beta hydrolase 117 364 IPR029058 -
Viun11g02002 400 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 90 397 - -
Viun11g02002 400 Pfam alpha/beta hydrolase fold 165 295 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02002 Viun-Chr11 35628657 35632883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g02002 174 254 Acyl Lipid Metabolism Gene Families AT4G02340 32.143 4.04e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02002 - - gmx:100785642 702.975