Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02000 ATGTCGGCACCGCAGAGATTTCTCTGCACTCTCTCTCACGGCTTTCCTCGCTCTTCTTCTCTCTGCACCTTCAAATCTAGAACCTTCCTTTTCCTTCCCTTCGTTCGCTCTTACCTCACCCTAACTCCCTTGCTCTCACCAATGCCTCGCAATCAGCGAACTGGCGCGCACATGGAGCGGCGATGGAAAGAGAAAGCCAAAACCGAGGCGCAGTTGTCGGCTACGGGAGACGTAGCTGCTGTAACTGCTGCGGAAACTGTTACTAATAAGATTGCCGGATTGAGTATTGGTGAGAACGGTGGGAAAACCGGTGCGCATGGTTCGGTTTGGAAACCTAAATCTTATGGAACTGCGAGTGGAGGCGCTGTTACTGAAGTGGAAAATGGAGCTGGAGTTGAGGCAAGTGTGGCTTCTGCGCAAAAGAATGGTGGAAGTGGTTTGAGTAAGATATTTCGAGGTAATCTGTTAGAGAAATTCAGTGTGAACAACTCCACGTACACACGTGCACAAATCAGAGCGACTTTCTATCCCAAATTTGAAAATGAAAAGTCGGATCAAGAGGTCCGGACCAGGATGATTGAGTTGGTAGCAAAAGGGTTGGCTACCTTAGAGGTTTCACTTAAACACTCTGGCTCTCTTTTTATGTATGCGGGTCATGAGGGTGGAGCTTATGCAAAAAACAGTTTCGGAAACATATATACTGCTGTTGGTGTATTTGTTCTTGGACGGATGTTTCGTGAGGCATGGGGAACTGAAGCTTCAAAAAAGCAGGCTGAATTTAATAATTTTCTTGAGAGAAACCACATGTGCATATCAATGGAACTGGTAACAGCTGTTCTTGGAGACCATGGACAGCGTCCCCAAGAAGATTATGCGGTAGTTACGGCAGTTACTGAACTGGGCAATGGAAAGCCAAAATTCTATTCAACTCCTGAGATAATAGCTTTCTGTCGAAAATGGCGCCTTCCAACAAATCATGTGTGGTTGTTTTCAACAAGAAAATCAGCCACTTCTTTCTTTGCTGCATTTGATGCCTTATGTGAGGAGGGTACTGCAACGTCTGTATGCAAGGCTCTTGATGAAATTGCTGACATCTCTGTACCAGGTTCAAAAGACCATGTAAAGGCCCAAGGTGAAATTTTAGAAGGTCTTGTGGCTCGTCTTGTAAGTCATGATAGTTCAAACCATATAGAGAAAACTTTGAAAGAATTTCCACCTCCACCTGCTGATGGAGTGGCCCTTGATTTTGGACCAAGTCTAAGGGAAATATGTGCAGCAAATAGATACAATGAAAAACAGCAAATAAAAGCACTTCTCGAGAGTGTTGGTAGTTCTTTTTGTCCTAGCCATTTGGATTGGTTTGGGACTGATGGTGCCGATTATCATTCAAGAAATGTGGACAGATCTGTTCTTTCAAAATTTTTGCAAGCCCATCCTGCAGACTATTCAACTAAAAAGATGCAGGAAGTTGTTCGATTGATGAGGGAGAAACGCTACCCTGCTGCCTTCAAATGTTATCATAACTTCCACAAGGTTGATGGCATGTCAAGTGACAACGTTTTCTATAAAATGGTCATTCATGTACACAGTGATTCTGGTTTTCGGAGATACCAGAAAGATATGAGGCTTAAGCCAGGATTATGGCCATTATATCGAGGTTTTTTTGTTGATATAAATTTATTTAACGCAAACAAGGAGACAGCTGCTGAAATTTCTAGTAACAGTGTAAATGAAACTGGTAGCAACAGCGCTGGGGAAGATGACTTTGCTGACGAAGATGCAAATTTAATGGTCAAATTGAAATTTCTTACATATAAGTTGCGAACATTTCTTATTCGAAATGGCTTGTCAATTCTGTTCAAAGAAGGCCCAGCTGCTTACAAGTCTTATTACCTCAGACAAATGAAAATTTGGGGAACCTCTCCAGCAAAGCAGAGAGAACTTAGCAAGATGCTTGATGAATGGGCTGTATATATACGAAGGAAGTGTGGAAATAAGCAGCTGTCATCATCAACATATCTGAGTGAAGCGGAACCATTTCTTGAACAGTTTGCAAAACGTAGTCCACAGAACCAAGTTCTGATAGGTTCTGCTGGTAATTTAGTTAGAACTGAAGATTTCTTGGCTATTGTTGAGGGAGGCCAGGATGAAGAAGGTGATCTTGTGGAAGAGCGTGAGATAGCATTGCCAGGGCCTAATATCTCAGTCAAAGATACAGTTCCAAAATATGAAGGGTTGATTGTATTCTTTCCTGGGATACCTGGTTGTGCTAAGTCCTCCCTTTGCAAAGAATTGCTAAAGGCCGAAGGAGGACTAGGAGATGCTCGACCACTTCATAGTCTCATGGGTGACCTGATTAAAGGAAAATATTGGCAGAAAGTGGCTGAAGAGCGCAGAAAGAAACCAAATTCGATAATGCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAAACTGATAGAAGACATGTGTCACAAAACCAGGGCATCTGCGGTACCAGTTGTAGCTGAATCTGAAGGAACCTATTCAAATCCTTTTTCTCTTGATGCATTAGCTATTTTCATGTTTCGTGTGCTTCAACGAGTCAATCATCCGGGAAATCTTGACAAAGCATCTCCAAATGCTGGCTATGTGCTGCTAATGTTTTATCATCTTTATGAGGGCAGGAGCCGTAAAGAGTTTGAGGGTGAATTAATTGAGCGTTTCGGGTCACTTGTCAAGATGCCACTATTGAAATCTGATAGGAACCCCCTTCCTAACCCAGTGCAGTCCATTTTGGAGGAAGGAATTGATTTATATAAACTTCACACTAAGAGACATGGAAGATTAGAGTCTACCAAAGGATCTTATGCAAAAGAATGGATAAAATGGGAGAAACAGTTACGGGATATTCTTTGTGGAAATGCTGAGTATTTTAATTCTATTCAGGTTCCATTTGAGTTTGCTGTCAAGCAAGTGTTGGAACAGTTGAGAAACGTTGCGAAGGGAGATTACACACCACCAGATACTGAAAAAAGGAAATTTGGTACCATTGTTTTTGCTGCTCTCACCGTGCCAGTTACTGAAATTAAAGGCGCCCTCAATAAATTGGCCGAGAGTAATCCCAAGATTGACGCATGGCTTAAAGACAAAAATCTCGAGAACCTTAATCGAGCTCATGTGACTCTTGCCCACAAGAAAAGTCACGGCATCAAAGCTGTAGCTGATTATGGTATCTATCTTAATAAAAAGGTTCCGGTGGAGTTGGCAGCACTACTCTTCTCAGATAAAATAGCTGCGTTGGAAGCTTTTCCCGGCTCAGTAGAAGGTGAGAAGATAATCTCAAAAAATCCGTGGGCTCACATAACTTTATGGACTGCTGAAGGTGTTGCACCCAAGGAGGCCAACATGTTACCGCAGTTGTTTGCAGCGGGGAAAGCAACTCGAATTGACTTCAATCCTCCCATCATTTTATCTGGCACAGTTGATTTTTATTGA 3480 0.425 MSAPQRFLCTLSHGFPRSSSLCTFKSRTFLFLPFVRSYLTLTPLLSPMPRNQRTGAHMERRWKEKAKTEAQLSATGDVAAVTAAETVTNKIAGLSIGENGGKTGAHGSVWKPKSYGTASGGAVTEVENGAGVEASVASAQKNGGSGLSKIFRGNLLEKFSVNNSTYTRAQIRATFYPKFENEKSDQEVRTRMIELVAKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLERNHMCISMELVTAVLGDHGQRPQEDYAVVTAVTELGNGKPKFYSTPEIIAFCRKWRLPTNHVWLFSTRKSATSFFAAFDALCEEGTATSVCKALDEIADISVPGSKDHVKAQGEILEGLVARLVSHDSSNHIEKTLKEFPPPPADGVALDFGPSLREICAANRYNEKQQIKALLESVGSSFCPSHLDWFGTDGADYHSRNVDRSVLSKFLQAHPADYSTKKMQEVVRLMREKRYPAAFKCYHNFHKVDGMSSDNVFYKMVIHVHSDSGFRRYQKDMRLKPGLWPLYRGFFVDINLFNANKETAAEISSNSVNETGSNSAGEDDFADEDANLMVKLKFLTYKLRTFLIRNGLSILFKEGPAAYKSYYLRQMKIWGTSPAKQRELSKMLDEWAVYIRRKCGNKQLSSSTYLSEAEPFLEQFAKRSPQNQVLIGSAGNLVRTEDFLAIVEGGQDEEGDLVEEREIALPGPNISVKDTVPKYEGLIVFFPGIPGCAKSSLCKELLKAEGGLGDARPLHSLMGDLIKGKYWQKVAEERRKKPNSIMLADKNAPNEEVWKLIEDMCHKTRASAVPVVAESEGTYSNPFSLDALAIFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYEGRSRKEFEGELIERFGSLVKMPLLKSDRNPLPNPVQSILEEGIDLYKLHTKRHGRLESTKGSYAKEWIKWEKQLRDILCGNAEYFNSIQVPFEFAVKQVLEQLRNVAKGDYTPPDTEKRKFGTIVFAALTVPVTEIKGALNKLAESNPKIDAWLKDKNLENLNRAHVTLAHKKSHGIKAVADYGIYLNKKVPVELAALLFSDKIAALEAFPGSVEGEKIISKNPWAHITLWTAEGVAPKEANMLPQLFAAGKATRIDFNPPIILSGTVDFY 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02000 1159 PANTHER TRNA LIGASE 1 103 1159 IPR038837 GO:0003972|GO:0006388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02000 - - gmx:100815563 2105.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02000 11 35604418 35626584 Viun11g02000 11 35604418 35626584 ECH