Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01999 ATGGCGTTCAGAGGGAAAGAAATGATGAAGAAAATTCTGAAGACGGTGGGAGAGAATGGTTTGAGTCGAAGAGAAAAGGAAACGTTGGAGAAATGCATGCCTCGAAGCAAGGTTGTGATGAATCGCGCCAAACGCGGTCTCTTTGCTGGGCGACACATTCAGTTTGGAAATAGTGTCAGTGAAGATGGCGGTAACAAGACAAGGAGAACTTGGAAGCCGAATGTCCAGGAAAAGCGGCTCTTCAGCTACATCCTAGATCGTCACGTTCGTGTTAAAGTGACCACACATGCCATCCGATGCATAGACAAGGCAGGTGGGATTGATGAGTACTTGCTGAAAACTCCTTATCACAAGATGGACACTGAAATGGGCATTCTCTGGAAGGCAAAAATTGAGAAATTGTATGAAGAGCTCGGCCAAAAGGAGGTTGTATTCTTTTCACCGGAGGCTGAAGCGAAGTTTGAGCAGGACTTTAAAGATTTGAAACTGTCTGAAAGGGAAGCACGAAAGGAGGTCAGAAGAAAGATGTTCACTGGGATGAGCAAGCACGAAGGGGCTCCTTTTTCGTATATCTTAGCTGCTGACAAGCTCAAAGCTGGAAGCTTTGTTTCAAATTGA 618 0.4547 MAFRGKEMMKKILKTVGENGLSRREKETLEKCMPRSKVVMNRAKRGLFAGRHIQFGNSVSEDGGNKTRRTWKPNVQEKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLKTPYHKMDTEMGILWKAKIEKLYEELGQKEVVFFSPEAEAKFEQDFKDLKLSEREARKEVRRKMFTGMSKHEGAPFSYILAADKLKAGSFVSN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01999 205 Hamap 50S ribosomal protein L28 [rpmB]. 42 110 IPR001383 GO:0003735|GO:0005840|GO:0006412
Viun11g01999 205 FunFam 54S ribosomal protein L24 47 118 - -
Viun11g01999 205 PANTHER 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL 1 184 IPR026569 GO:0003735
Viun11g01999 205 Pfam Ribosomal L28 family 45 104 IPR026569 GO:0003735
Viun11g01999 205 Gene3D Ribosomal protein L28/L24 47 118 IPR037147 GO:0003735
Viun11g01999 205 SUPERFAMILY L28p-like 43 119 IPR034704 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01999 K02902 - gmx:100791613 361.688