Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01998 ATGGGTGAAACATCATCTTCCTCAGAGGACCAGAATCAACATAATATTCCAATCGAAATTATCAGCGACGACGAAATGGCTCTCATTGAAGCTGCTTTGGCCTTCGCTTCCACTCGAACTTGCTCCGCAATTCGTTCTTCTTCTTGTTCTTCGTCTCCTTCAAAATCACCCCTTCACAATAATGCGTTATCCATCACCGTTGTGTCGAAAAGAAGCTCATCGAGTGGCAGTGATATTGAGGACTTACCCGCTCTCAAGAGAAAGCACACTCTTTCCGATTCCTTTCTTCGCCGCTTCAGAAACAAACGGGGTTTGTCCGTAACGGATATTACTTCTACGGAATGGTGCCCGAAACAAATGGAGTTTTCTCTTCTTCTTGGAGGGAGAAAGGTTAATCAAGCAATGAGAGCAGGCATTGCTCGCCATGTGAAGCTTGAACAAGAGGTTTTGAAACGGGTGGAAGTGAAGGTCAAATATCAAGAAGATATGTGGGCCCTGAAGTTTCTTAATTTTATAAATGGTGTAAATCAATTATTATTTGAAGGAATGACTCGTGAACTGCCAGTAATAGGCTTTGCAGAAGATATATGGATGGTGGGAGTCATTGATGAGATTCGGATGCCATTAAAAGAAAATCATCATAATCCGATACTAATTGACACAAAGACTCGTGCTCGAGATACACTTCCTGCTGAACCGCAACGAAGAAATGGACGGCTTCAATTGATGTGCTACAAGTACTTGTGGGACAATTTGGTTGCTGATAATTTTCCTTCTAATGTTTTTTTCACTTATTTTGGCTTAAACCCCCAACATAATCTATGTGAAGATCTAAAAGTGACAAGTGCTGACTCTGGATTTTCTGCTTCGACACTGGATGATGTAGTGAGATATTACAGAAATACATGTAGGATGCTGGCCCCTGCTCATGATCAACTCTTGTTGAGATATGAGTATCAGAAAGATCATTCACTGCTTGGTGAAGATAAATTCACATATGATCATGATTGGCTAACGAATCAAATTCATTCGTGTCTTAAGTTTTGGGTTGGAGAACAAGAAGCCACTTACACTCCTGAAGATGAACGCTGGAAATGTGGTTACTGTCAATTTGCTCGTGTCTGTCCTGCATACAATGATAGTAAAGGAACGATGGAACCTAAAAGCAATGATTTAAACATCAAAGAAGGCTAG 1194 0.4087 MGETSSSSEDQNQHNIPIEIISDDEMALIEAALAFASTRTCSAIRSSSCSSSPSKSPLHNNALSITVVSKRSSSSGSDIEDLPALKRKHTLSDSFLRRFRNKRGLSVTDITSTEWCPKQMEFSLLLGGRKVNQAMRAGIARHVKLEQEVLKRVEVKVKYQEDMWALKFLNFINGVNQLLFEGMTRELPVIGFAEDIWMVGVIDEIRMPLKENHHNPILIDTKTRARDTLPAEPQRRNGRLQLMCYKYLWDNLVADNFPSNVFFTYFGLNPQHNLCEDLKVTSADSGFSASTLDDVVRYYRNTCRMLAPAHDQLLLRYEYQKDHSLLGEDKFTYDHDWLTNQIHSCLKFWVGEQEATYTPEDERWKCGYCQFARVCPAYNDSKGTMEPKSNDLNIKEG 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01998 397 PANTHER EXONUCLEASE V 8 383 IPR019190 GO:0045145
Viun11g01998 397 Gene3D - 85 377 IPR011604 -
Viun11g01998 397 Pfam Exonuclease V - a 5' deoxyribonuclease 95 212 IPR019190 GO:0045145
Viun11g01998 397 Pfam Exonuclease V - a 5' deoxyribonuclease 305 375 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01998 Viun-Chr11 35595293 35598629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01998 K17815 - gmx:100792136 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01998 11 35595293 35598629 Viun11g01998 11 35595293 35598629 ECH