Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01980 ATGATGAAAAAGCATTGTCTCTTTTCCTTCTCACTACCACTGCTAGTTTCATTTTTGTATTTCACCACCACTTTAGCCCAATTATCACCAGCTTCTGCCCCCCTCAAACCATCACAACCTACACCTACCCCACCAGCTGAAGCTCCTAAACAACCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCCACTCCTGACACTTCAGCAGTTGACATTGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATTCTTATCAGACTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAACTCCTCACTACTAAATCAGGTGGCATCACCATTCTAGCACCTGATGACAGTTCCTTCTCCGAACTCAAACCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCATGTTCTTTCAGAGTATGTGTCTAGCTCCAACTTTGATACTCTGACCAACCCTGTGAGAACACTTGCAGGGGATAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACAGGTGAGGTTAACACCACCATCACTGGCATTGTATACACAGATAAGCATCTTGCTATTTACAAGGTGAGGAAGGTTCTTCTTCCTATGGACTTCTTTGTTGTTGCTAAGGCACCTGCAAAGGCACCCTCTCTGGCACCAGAATCTTCGGCAAAGGCGCCTAAAGCAGATAAAGAAAAGTCTCTGTCTCCAGATTCCTCAGAATCATCTGAGATTAATTCCACCAACGGTACCTCTGGCACTGTGAAAATCAGTCATGGAATGTGGTTGTCTCTTGTCCTTGGACCAATTCTCCTTATGATATTGCCATCATAA 876 0.4486 MMKKHCLFSFSLPLLVSFLYFTTTLAQLSPASAPLKPSQPTPTPPAEAPKQPLVPSLPQSPSDSTPDTSAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKPGFLNSLSDGQKLELLQFHVLSEYVSSSNFDTLTNPVRTLAGDKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVRKVLLPMDFFVVAKAPAKAPSLAPESSAKAPKADKEKSLSPDSSESSEINSTNGTSGTVKISHGMWLSLVLGPILLMILPS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01980 291 FunFam Fasciclin-like arabinogalactan protein 11 56 216 - -
Viun11g01980 291 MobiDBLite consensus disorder prediction 35 56 - -
Viun11g01980 291 SUPERFAMILY FAS1 domain 63 217 IPR036378 -
Viun11g01980 291 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Viun11g01980 291 SMART fasc_3 112 217 IPR000782 -
Viun11g01980 291 MobiDBLite consensus disorder prediction 31 67 - -
Viun11g01980 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 263 IPR045003 -
Viun11g01980 291 Pfam Fasciclin domain 82 216 IPR000782 -
Viun11g01980 291 Gene3D FAS1 domain 55 216 IPR036378 -
Viun11g01980 291 MobiDBLite consensus disorder prediction 232 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01980 Viun-Chr11 35460934 35462118 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01980 - - gmx:100776667 376.711