Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01978 ATGAAACAAGCAACCCTTTTCACCTTATCTCTCTTCCTACTCTTATGCTCTACCAGTTTGGCCATTTCACCTGCACCTGCAGCAGCACCAAAAGCACCTGCAGCAAAAACTCCCCATACCCCAAAGGCTTCAGCACCGTCACCAAAACCATTAGTCCCAACATTACCTCAGTCCCCAGATTCCCCTGACTCTGTCCCTGATGACATCACCAGAATCCTTAAAAAGGCCAAAATGTTCTCAACCCTGATTCGCCTCCTCAAAACCACAGAAATCATGAACAACATCAACTCACAGCTCATAACAGCAAAGAGTGGGGGCATAACCATTCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCTGGCTTCCTCAACTCCCTCAACGAAGGCCAGAAAATCGAACTTGTGCAGTTCCACATATTGCCAGAGTTTGTGTCAAGCTCAAACTTTGATTCTCTGAGCAACCCTGTGCAGACAGTGGCTGGCAAAGACCCTGTAAGGCTTCCACTGAACGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTCAATGCCACCGTTTTGGGTGTAGTCTACTCCGATAACAAACTTGGGATTTATCACGTCGACAAGGTGCTTCTTCCTCTTGATTTCTTTGCAACCAATAAGGCTCCAGCGTTGGCTCCAACAACTCTTGCAAAGGCTCCCAAAGCCGCTAAGGAAAACTCTTCTGAGGACGATCAGGATGAAACAAATCAGGATCATAATAAATCGGGAGCAGTGAATTTGATGAGCATTGGTGGAACAAAGTTTATGGCACTTGGCATAGCTTTGATGGCAGTGGCAACCATGTGGTGTTGA 852 0.4648 MKQATLFTLSLFLLLCSTSLAISPAPAAAPKAPAAKTPHTPKASAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSTLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPVRLPLNVNALGNSVNISTGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFATNKAPALAPTTLAKAPKAAKENSSEDDQDETNQDHNKSGAVNLMSIGGTKFMALGIALMAVATMWC 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01978 283 MobiDBLite consensus disorder prediction 236 251 - -
Viun11g01978 283 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 263 IPR045003 -
Viun11g01978 283 Pfam Fasciclin domain 78 212 IPR000782 -
Viun11g01978 283 MobiDBLite consensus disorder prediction 229 256 - -
Viun11g01978 283 Gene3D FAS1 domain 54 212 IPR036378 -
Viun11g01978 283 SUPERFAMILY FAS1 domain 49 213 IPR036378 -
Viun11g01978 283 ProSiteProfiles FAS1/BIgH3 domain profile. 66 210 IPR000782 -
Viun11g01978 283 FunFam Fasciclin-like arabinogalactan protein 11 54 212 - -
Viun11g01978 283 SMART fasc_3 108 213 IPR000782 -
Viun11g01978 283 MobiDBLite consensus disorder prediction 29 67 - -
Viun11g01978 283 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01978 Viun-Chr11 35440654 35441773 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01978 - - pvu:PHAVU_011G074500g 436.032