Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01977 ATGATGCAACATTCTCTCTTCTTATGTGCCTCACTTGTACTTGTGATAGTCACCACATCAGCTCAACCATCACCCGCAACAGGACCACAATCACCATTGGCATCTCCATCGGGAATGAATACTGTTCCATTGGTACCAGTGTCTCCCAACGCTGCTCCTTCACCCGCCACCCCAAAAGCTTCTACCATTGACATTGCTCAAATACTGAGTAAGGCCAAAAGATTTTCCGTTCTGATTCGGCTTTTGAAGACGACCCAGTTGATCAACCAACTCAACTCTCAACTCCTCACATCGGGTTCCGGGGGATTGACCATTTTGTCCCCACCTGACAGTGCCTTTTCAAAGCTAAAAGGAGGGTTCTTGAACTCACTCGACGATAGGCAAAAGGTGGAACTTTTACAATTCCACACTCTTTCTTCCTTCATCTCAATCTCCAACTTCGACACTCTCACCAACCCCGTTCAGACCCAAGCCGGTGATGACCCCCAGAGGCTGCAACTTAACATCACCACTTACGGTGGCAGCCACGTGAGCATGAGCACCGGTGCCGTCAATGCCACCATTACAGGCACCGTGTATGCAGACAACAAGCTTGCTATTTATGAGGTGGACAAGGTGCTTCTTCCACTTGACGTGCTTCTTCCTAAACCTAATAAGGCTCCGGCACCGAAATCATCTGCAGACAAAAGTGGTGATACTAACAAAAATATGGATGATGACAGCGGTGTTCCGGTGGAGGCTTCTGGTGGTTGCATGAACTTCAACAGCGTACTTGTAAAGTGGATGTCTTTTGTTGTTGGGGTTGCTTTCATGGGTGGAGCCATGATATGA 831 0.4813 MMQHSLFLCASLVLVIVTTSAQPSPATGPQSPLASPSGMNTVPLVPVSPNAAPSPATPKASTIDIAQILSKAKRFSVLIRLLKTTQLINQLNSQLLTSGSGGLTILSPPDSAFSKLKGGFLNSLDDRQKVELLQFHTLSSFISISNFDTLTNPVQTQAGDDPQRLQLNITTYGGSHVSMSTGAVNATITGTVYADNKLAIYEVDKVLLPLDVLLPKPNKAPAPKSSADKSGDTNKNMDDDSGVPVEASGGCMNFNSVLVKWMSFVVGVAFMGGAMI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01977 276 MobiDBLite consensus disorder prediction 22 56 - -
Viun11g01977 276 SMART fasc_3 104 210 IPR000782 -
Viun11g01977 276 Pfam Fasciclin domain 74 209 IPR000782 -
Viun11g01977 276 ProSiteProfiles FAS1/BIgH3 domain profile. 62 207 IPR000782 -
Viun11g01977 276 FunFam Fasciclin-like arabinogalactan protein 11 48 209 - -
Viun11g01977 276 Gene3D FAS1 domain 62 209 IPR036378 -
Viun11g01977 276 MobiDBLite consensus disorder prediction 22 44 - -
Viun11g01977 276 SUPERFAMILY FAS1 domain 59 210 IPR036378 -
Viun11g01977 276 MobiDBLite consensus disorder prediction 218 242 - -
Viun11g01977 276 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 258 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01977 Viun-Chr11 35438511 35439518 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01977 - - gmx:100819829 375.17