Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01967 ATGAAGATGAAACAAGCAACACTTTTCTCCTTATCACTCTTCTTACTCTTATGCTCTACCAGCTTGGCCATTTCACCTGCACCTGCAGCAGCACCAAAAGCACCTGCAGCAAAAACTCCCCATACCCCAAAGGCTGCAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAGTCCCCAGACTCCCCTGACTCTGTCCCTGATGACATCACAAGAATCCTCAAAAAGGCCAAAATGTTCTCAACCCTGATTCGCCTCCTCAAAACCACAGAAATCATGAACAACATAAACTCACAGCTCATAACAGCAAAGAGTGGGGGCATAACCATTCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCTGGCTTCCTCAACTCCCTCAACGAAGGCCAGAAAATCGAACTTGTGCAGTTCCACATATTGCCAGAGTTTGTGTCAAGCTCAAACTTTGATTCTCTGAGCAACCCTGTGCAGACAGTGGCTGGCAAAGATCCTGTAAGGCTTCCACTGAACGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTCAATGCCACCGTTTTGGGTGTAGTCTACTCCGATAACAAACTTGGGATTTATCACGTCGACAAGGTGCTTCTTCCTCTTGATTTCTTTGCAACCAACAAGGCTCCAGCTTTGGCTCCTTCATCTCTTGCAAAGGCTCCCAAAGCTGCAAAGGAAAATTCTTCTGAGGATGATCAAGGCGAAACAAAGCAGGTTCAGAGTAAATCTGGGGCAGGGAGTTTGGTTGGCCTTGGTGGAACAACGTTGATGTCTCTCGGAATAGTTTTGGTCGCAGTTGCAACCACGTGGAGTTGA 858 0.4697 MKMKQATLFSLSLFLLLCSTSLAISPAPAAAPKAPAAKTPHTPKAAAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSTLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPVRLPLNVNALGNSVNISTGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFATNKAPALAPSSLAKAPKAAKENSSEDDQGETKQVQSKSGAGSLVGLGGTTLMSLGIVLVAVATTWS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01967 285 MobiDBLite consensus disorder prediction 230 256 - -
Viun11g01967 285 Gene3D FAS1 domain 56 214 IPR036378 -
Viun11g01967 285 MobiDBLite consensus disorder prediction 31 68 - -
Viun11g01967 285 ProSiteProfiles FAS1/BIgH3 domain profile. 68 212 IPR000782 -
Viun11g01967 285 Pfam Fasciclin domain 80 214 IPR000782 -
Viun11g01967 285 SUPERFAMILY FAS1 domain 51 215 IPR036378 -
Viun11g01967 285 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 263 IPR045003 -
Viun11g01967 285 SMART fasc_3 110 215 IPR000782 -
Viun11g01967 285 FunFam Fasciclin-like arabinogalactan protein 11 56 214 - -
Viun11g01967 285 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01967 Viun-Chr11 35361588 35362743 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01967 - - gmx:106794109 414.846