Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01966 ATGAAACAAGCAACCCTTTTCACCTTATCTCTCTTCCTACTCTTATGCTCTACCAGTTTGGCCATTTCACCTGCACCTGCAGCAGCACCAAAAGCACCTGCAGCAAAAACTCCCCATACCCCAAAGGCTTCAGCACCATCACCAAAACCATTAGTCCCAACATTACCTCAGTCCCCAGATTCCCCTGACTCTGTCCCTGATGACATCACCAGAATCCTCAAAAAGGCCAAAATGTTCTCAACCCTGATTCGCCTCCTCAAAACCACAGAAATCATGAACAACATAAACTCACAGCTCATAACAGCAAAGAGTGGGGGCATAACCATTCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCTGGCTTCCTAAACTCCCTCAACGAAGGCCAGAAAATCGAACTTGTGCAGTTCCACATATTGCCAGAGTTTGTGTCAAGCTCAAACTTTGATTCTCTGAGCAACCCTGTGCAGACAGTGGCTGGCAAAGATCCTGTAAGGCTTCCACTGAACGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTCAATGCCACCGTTTTGGGTGTAGTCTACTCCGATAATAAACTTGGGATTTATCACGTCGACAAGGTGCTTCTTCCTCTTGATTTCTTTGCAACCAACAAGGCTCCAGCTTTGGCTCCAACATCTCTTGCAAAGGCTCCCAAAGCTGCTAAAGAAAACTCTTCTGATGACGATCAAGAAGAGACAAACCAGGATCATAATAAATCTGGGGCACTCAGTTTGAGCAGCGTTAGTGGAACAAAGTTGATGTCACTTGGGATAGCCTTGGTTGCTATGGCAACCATGTGGAGTTGA 852 0.4601 MKQATLFTLSLFLLLCSTSLAISPAPAAAPKAPAAKTPHTPKASAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKMFSTLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPVRLPLNVNALGNSVNISTGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFATNKAPALAPTSLAKAPKAAKENSSDDDQEETNQDHNKSGALSLSSVSGTKLMSLGIALVAMATMWS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01966 283 Pfam Fasciclin domain 78 212 IPR000782 -
Viun11g01966 283 MobiDBLite consensus disorder prediction 236 251 - -
Viun11g01966 283 MobiDBLite consensus disorder prediction 228 258 - -
Viun11g01966 283 SUPERFAMILY FAS1 domain 49 213 IPR036378 -
Viun11g01966 283 ProSiteProfiles FAS1/BIgH3 domain profile. 66 210 IPR000782 -
Viun11g01966 283 FunFam Fasciclin-like arabinogalactan protein 11 54 212 - -
Viun11g01966 283 Gene3D FAS1 domain 54 212 IPR036378 -
Viun11g01966 283 SMART fasc_3 108 213 IPR000782 -
Viun11g01966 283 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 267 IPR045003 -
Viun11g01966 283 MobiDBLite consensus disorder prediction 29 67 - -
Viun11g01966 283 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01966 Viun-Chr11 35357987 35359076 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01966 - - pvu:PHAVU_011G074500g 469.929