Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01965 ATGAAGCTATTAGTTTTATTCTCCCTCTTACTCCTCATACCTTTTTCCTCCTTATATTCAACCACATTAGCCCAAGCACCTGTTGCAGCTCCATCAAAACCAATTGTCCAAGCACTATCCCAGTCACCCTCTTCTTCAGACACCTCTGATTCTTCCCCTGATGATCTCATCAGAATATTAAGAAAGGCCAAATCATTTAACATCCTAATTCGGCTGATGAAAACCACCCAATTGATCAACCAACTCGATGCTCAGCTCATAACCATAAAATCAGGTGGCTTAACCATCTTTGCCCCAGATGACAGTAGCTTTTCAAACCTCAAAGTAGGGTTCCTGAACTCTCTGGCTGATAATCAAAAGATCGAACTTTTGCAGTTCCATGTTCTTCCCACTTACGTTTCAAGCTCAAACTTTGATTCTCTGAGCAACCCTGTGAGAACACTAGCTGGGGATAACCCTGACAGGTTGCAACTAAACGTGACAGCTTATGGCAACAATGTGAATATCTCAACAGGAGTGGTCAATGCCACGATCACAGGGGTTATATACTCAGACAAGGTGCTTGCTATATATCATGTTGACAAGGTGCTTCTTCCTTTGGACTTCTTCAAACCTAAGCCACCAGCTCCTGCACCCTCTCCTTCAATAGCACCAAAAACTGATAATGATAACTCCTCTGCTGATGATAGTCTTGGAACATCCAAGGACAGTTCTGGCGCATGGAGTTTGACGAGTTCTCTAGGAACAACGTTGGTGTCCCTTGGATTTTCTTTAGTTGCATTGGTGATTATTTCAAGTTGA 801 0.4282 MKLLVLFSLLLLIPFSSLYSTTLAQAPVAAPSKPIVQALSQSPSSSDTSDSSPDDLIRILRKAKSFNILIRLMKTTQLINQLDAQLITIKSGGLTIFAPDDSSFSNLKVGFLNSLADNQKIELLQFHVLPTYVSSSNFDSLSNPVRTLAGDNPDRLQLNVTAYGNNVNISTGVVNATITGVIYSDKVLAIYHVDKVLLPLDFFKPKPPAPAPSPSIAPKTDNDNSSADDSLGTSKDSSGAWSLTSSLGTTLVSLGFSLVALVIISS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01965 266 MobiDBLite consensus disorder prediction 209 238 - -
Viun11g01965 266 ProSiteProfiles FAS1/BIgH3 domain profile. 53 197 IPR000782 -
Viun11g01965 266 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 247 IPR045003 -
Viun11g01965 266 Gene3D FAS1 domain 28 199 IPR036378 -
Viun11g01965 266 Pfam Fasciclin domain 65 199 IPR000782 -
Viun11g01965 266 MobiDBLite consensus disorder prediction 217 238 - -
Viun11g01965 266 FunFam Fasciclin-like arabinogalactan protein 11 38 199 - -
Viun11g01965 266 SMART fasc_3 95 200 IPR000782 -
Viun11g01965 266 SUPERFAMILY FAS1 domain 52 200 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01965 Viun-Chr11 35355848 35357131 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01965 - - gmx:100791112 368.622