Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01964 ATGGTGATGATGATGAAGAAGCATCCACTCTTCTCTCTCACCCTCCCACTTCTTCCGATACTACTCTTTTCCCACTTCACCATCTCTCTAGCCCAGTCACCCGCCGCCGCTCCAACCGCCCCCGCCACCGCCACCACTGCCACCACTCCGGCGCCGGTACCCTCCTCACCCCCGACAGACATCATCAGAATTCTCAAAAAGGCCGGGGGTTTCACCACCCTTATCCGTCTCCTTCAAGCCACGCAAGTTTCCAACCAAATCAACTCCCAACTCCTCACCTCAAACGGTGGCTTAACCTTATTAGCACCAAACGACAATGCCTTCTCAAGCCTCAAACCTGGCTTCCTCAACTCCCTCAACGACCAACAAAAGAACGAGCTCATCCAGTTCCACTTGCTACCCACATTCGTTTCCGTTTCGAACTTTGACACTCTCAGCAACCCCGTGAGAACGCAGGCCGGTGAAAACCCTGATCGGTTGGCACTGAACATAACAAGCTCCGGAGGGAACCAAGTGAACATGACCACCGGGATCGTCAATGTTACGTTAGGTGGCACTGTCTACACCGATCACCAGCTTGCGGTTTACCAAGTGGACAAGGTGCTTCTTCCTCGGGATTTCTTTGTCGCTAAGCCTCCTTCTCCGGCTCCGGCGCCAGAAAAGCCTAAGGGGTCTAAGAAGAAATCTGCAGACAGCACTGGAACTCCTGCGGATGATGCTGAATCTGCTGCTGTCAGTGTGAAACAGCAGCATGTGATATGGGTTACTGTTGTTGCTGCAGTTTCAGTTGCAGCATTTTCGTGGTCACAATGA 813 0.5277 MVMMMKKHPLFSLTLPLLPILLFSHFTISLAQSPAAAPTAPATATTATTPAPVPSSPPTDIIRILKKAGGFTTLIRLLQATQVSNQINSQLLTSNGGLTLLAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPTFVSVSNFDTLSNPVRTQAGENPDRLALNITSSGGNQVNMTTGIVNVTLGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPSPAPAPEKPKGSKKKSADSTGTPADDAESAAVSVKQQHVIWVTVVAAVSVAAFSWSQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01964 270 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 257 IPR045003 -
Viun11g01964 270 Gene3D FAS1 domain 35 205 IPR036378 -
Viun11g01964 270 FunFam Fasciclin-like arabinogalactan protein 11 35 204 - -
Viun11g01964 270 SUPERFAMILY FAS1 domain 39 205 IPR036378 -
Viun11g01964 270 MobiDBLite consensus disorder prediction 212 242 - -
Viun11g01964 270 Pfam Fasciclin domain 70 204 IPR000782 -
Viun11g01964 270 SMART fasc_3 99 205 IPR000782 -
Viun11g01964 270 ProSiteProfiles FAS1/BIgH3 domain profile. 58 202 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01964 Viun-Chr11 35352004 35353103 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01964 - - gmx:100818760 367.081