Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01961 ATGATGAAAAAGCAATGTGTCTTTTCCTTCGCACTAGCACTGCTAGTTTCGTTTTTGTATTTCACCAACACTTTAGCTCAGTTATCACCGGCTGCTTCCCCTCTAAAACCACCCCAACCTACTCCTACTCCACCAGCTGCAGCCCCTAAGCCATTGGTGCCGTCGTTGCCAGAGTCACCAAGTGATTCCACCCCTGACACTGCAGCAGCTGTTGACATCGTTGGAATCCTGAGGCAGGCCAAGTCATTCAACATTCTTATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCAGGTGGCATCACCATTCTAGCACCTGATGACGGTTCCTTCTCCGAACTCAAACCAGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCACGTTATTTCAGAGTATGTGTCTAGCTCCAACTTTGATACCCTAACCAACCCTGTGAGAACACTTGCAGGAGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCAACAGGTGAGGTTAACACCACCATCACTGGCATTGTATACACAGATAAGCATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCTATGGACTTCTTTGCAGTGGCCAAGGCACCTGCAAAGGGACCATCTTTGGCACCAGAACCGTCTGCAAAGGCTCCTAAAGCAGATAAGGATAATTCACTGTCCCCAGACTCCTCAGAATCATCTCAGATTAATTCCTCAAAGGATAACTCTGGCACAGTGAAAATCAATGTGTATGGAAAGTGGCTGTCCCTTCTTCTTGGAGTAGTTCTCATGACTGTTTTCTCATCATAA 879 0.4664 MMKKQCVFSFALALLVSFLYFTNTLAQLSPAASPLKPPQPTPTPPAAAPKPLVPSLPESPSDSTPDTAAAVDIVGILRQAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDGSFSELKPGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIVYTDKHLAIYKVGKVLLPMDFFAVAKAPAKGPSLAPEPSAKAPKADKDNSLSPDSSESSQINSSKDNSGTVKINVYGKWLSLLLGVVLMTVFSS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01961 292 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Viun11g01961 292 FunFam Fasciclin-like arabinogalactan protein 11 55 216 - -
Viun11g01961 292 Pfam Fasciclin domain 82 216 IPR000782 -
Viun11g01961 292 MobiDBLite consensus disorder prediction 250 264 - -
Viun11g01961 292 MobiDBLite consensus disorder prediction 31 66 - -
Viun11g01961 292 Gene3D FAS1 domain 56 216 IPR036378 -
Viun11g01961 292 MobiDBLite consensus disorder prediction 33 58 - -
Viun11g01961 292 MobiDBLite consensus disorder prediction 228 264 - -
Viun11g01961 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 271 IPR045003 -
Viun11g01961 292 SMART fasc_3 112 217 IPR000782 -
Viun11g01961 292 SUPERFAMILY FAS1 domain 68 217 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01961 Viun-Chr11 35325107 35326280 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01961 - - gmx:100792674 455.677