Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01955 ATGCCGAATGAGATCATTGCAAATGTTTTATCTCGGTTGACATTGAAAGAAGCTGCTAGAACCAGCGTATTGTCAACTACATGGAGATATCAATGGACCTATTTCAATGGTGACTTGGACTTTGATAATTCTCTCAGGACTCTTCTCTTGCGTCATGAGCATGTTGGACTTTTGACCAAGTGCAAAGTTTTTGTTCGTGAGTGGGAGAGGTTCATGAGCCGTTTGCAACATGTGATGAAATCGCTGAAATGCCACTCCATGCATGGACTCAGAATCTGCATGGATATGGGCAACCCTTGGAAGGTGACTGAGTGGGTGAACTTTGCTGCTGAAAAGAATGTTGAAACGTTGGACCTGGATTTTTCATACAATTTCATGGAACCATTCTTTGAAATAAGTGAGAACATTCGTAATGTGTTGTCAAAGAGTTTTGAAATGAGGGCACTGAGAGTTCTGCGTTTGGCTTCTGTGGACGTGAGTGGTGAGATCATTGAGAGTTTTCTAGCATCTTGTCCACTGCTTGAAACATTATGTGTCAGAGGATCAAAAAGCGTTATGCGCTTGAAAGTTCAGGGTCAAGGACTGATGTTGAAGCATTTGGAGTTGGTTGAATGTCATATTTCGCATCTTCATATCTGTGCTGAAAATCTGGTGACATTTTCGTACACTGGAGATTATGGAAATTTTAACTTTGAAACTGTTCCAAGCCTTGTGGAGGTCTCCTTTGGAGGAAAATATTGTAATTACCTGCTATCGAACATGGAAGATGTTCAACTTTATGCAGTGCTTTCGCAGGTTCATGTTCTGAAATTGGAACTGTTCATACTTTATGGGGGAATTCTTGAAGCCCTGCCTGTGTTAGGTAATGTTAGGCACCTGGAACTGCGAATTCGTCACAGGTGTGGAGGGCAACTTGATCGTACTGTTTCATTGCTGAGTGCATTCCCTTCAATAAGTGTGCTTAAGATTAAGTTCATGAGGACCACTATCTGGGAATTGGATGAGGGGTGGAAGGCCAATCTGAAGCATGAGTATCCAAACCTGAGGGAGCTGGAAGTGTCTGGGTACCGAAGAGACTCATGTCAAATTGAGTTGCTGATCAGTATATTTAAAAAGGCACCAAATCTGAACAGGATCGTTGTGGATCCCTTGACTTCAATGCATGTGCAAAGATCACCTGATGTCAAGGCCAGCATTAGAGAAACGCAACGTGATATGACAATATGGTATGTTGATGCTCTCAAACCTCATGTGCCTCCTTCAACTCAGTTGATTGTGCTCTAA 1284 0.4237 MPNEIIANVLSRLTLKEAARTSVLSTTWRYQWTYFNGDLDFDNSLRTLLLRHEHVGLLTKCKVFVREWERFMSRLQHVMKSLKCHSMHGLRICMDMGNPWKVTEWVNFAAEKNVETLDLDFSYNFMEPFFEISENIRNVLSKSFEMRALRVLRLASVDVSGEIIESFLASCPLLETLCVRGSKSVMRLKVQGQGLMLKHLELVECHISHLHICAENLVTFSYTGDYGNFNFETVPSLVEVSFGGKYCNYLLSNMEDVQLYAVLSQVHVLKLELFILYGGILEALPVLGNVRHLELRIRHRCGGQLDRTVSLLSAFPSISVLKIKFMRTTIWELDEGWKANLKHEYPNLRELEVSGYRRDSCQIELLISIFKKAPNLNRIVVDPLTSMHVQRSPDVKASIRETQRDMTIWYVDALKPHVPPSTQLIVL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01955 427 Gene3D Ribonuclease Inhibitor 61 398 IPR032675 -
Viun11g01955 427 SUPERFAMILY F-box domain 1 34 IPR036047 GO:0005515
Viun11g01955 427 Pfam F-box domain 1 30 IPR001810 GO:0005515
Viun11g01955 427 PANTHER F-BOX PROTEIN-LIKE 2 385 - -
Viun11g01955 427 SUPERFAMILY RNI-like 103 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01955 Viun-Chr11 35288678 35290375 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01955 - - gmx:100778140 562.377