Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01949 ATGAATGTTTCTGCGCAAGGATTGCTTCTCCTCAACACTAGTTTCTTTTCCAATTTCTCCTTCCGAGGGTTTCGCAGGTTGTCAGTTGTTCGACGTTCGCAACAGTGTCACGGGCTGAGAAGAGGTTTCTCGAAAAACATGGCTTGCAGTGTGGAAAATTGTGATATGGGTAGTGGGGTGGTTCATCCAGCCACGGATGCTTACGCTGGAGAGGCAGTTGAAGCTTTGAAAGCTGGGAAAGTCATAGCAGTGCCCACTGATACGCTCTATGGGTTTGCTTGTGATGCTTGCTCATTGGAAGCGGTTAACAGGATTTATGAGATCAAAGGCCGTAGACATACAAGCCCTTTGGCTATTTGTGTTGGTGACGTATCAGACATAACCCGTTTTGCCGTCACTGACCATTTACCTCACGATCTGCTTGATTCCCTCCTACCTGGGCCTGTTACAGTTGTACTAAAACGAGGAGAGTCAAGTATTCTTGAACGATCTTTGAACCCAGGATTGGATAGTATAGGAGTTAGAGTGCCTGATTGCAATTTCATCAGAACCATTGCCCGTGCTTCAGAAACTGCTCTAGCCCTCACCAGTGCAAACTTAAGTGGACAGCCAAGTAGTCTTTCCACCAAAGATTTTGAGAACCTCTGGGAACACTGTGCTTTTGTTTATGATGGTGGTTTGATTCCATCAAGTCGTGCAGGTTCTACAGTTGTGGACCTCACTACACCACAAAAATACAGGATACTTAGACCTGGAAGTGCAAAGGAAGAGACAGTTGCCATCTTGGAGAAGCATTCTTTCGTTGAGGCAGTGACCTCTTAA 822 0.4599 MNVSAQGLLLLNTSFFSNFSFRGFRRLSVVRRSQQCHGLRRGFSKNMACSVENCDMGSGVVHPATDAYAGEAVEALKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRRHTSPLAICVGDVSDITRFAVTDHLPHDLLDSLLPGPVTVVLKRGESSILERSLNPGLDSIGVRVPDCNFIRTIARASETALALTSANLSGQPSSLSTKDFENLWEHCAFVYDGGLIPSSRAGSTVVDLTTPQKYRILRPGSAKEETVAILEKHSFVEAVTS 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01949 273 SUPERFAMILY YrdC/RibB 69 258 IPR017945 -
Viun11g01949 273 FunFam YrdC N6-threonylcarbamoyltransferase domain containing 60 262 - -
Viun11g01949 273 ProSiteProfiles YrdC-like domain profile. 66 254 IPR006070 GO:0003725
Viun11g01949 273 Pfam Telomere recombination 74 252 IPR006070 GO:0003725
Viun11g01949 273 PANTHER SUA5 53 265 - -
Viun11g01949 273 NCBIfam L-threonylcarbamoyladenylate synthase 71 259 IPR006070 GO:0003725
Viun11g01949 273 Gene3D DHBP synthase 61 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01949 Viun-Chr11 35253682 35256930 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01949 K07566 - gmx:100791087 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01949 11 35253682 35256930 Viun11g01949 11 35253682 35256930 ECH