Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01920 ATGGGTTTTGGTCGAACTTCGACCTCATCGAGAAGTGGAGAATGCTTGGAAGGGATGCTTAGTGACTATGTTGGAGGAAGAAACAAAGTGAAGGCTCAGAAAGGTTCCTCCACAAAGTTCGTTGCAGCACTCACTTGCCTTCAGTTTTTCTTTGCAGTTTATGCAACATTCCTATTGTATTACATGGGGCCTTCCATTGATTTAAGAACCAAACCAGAGTTCACATGGGCTACCAAAATTGCCCAGCAATGGAAACAACTTATGATCACACCCCACGTTGTTGGCCACTACCAAGAAGCTGCTTCTTCTCTCGTCATGGAGGGTGTTCTTCCCACAAATCCATCACAAGTGTGTGAGAATGAGAAGATAGACTTCCAGCAAAAGAAGTCCAATGATGTCCAAATGATCAAGATAAAGAGAGAGCTCTACGATGAGGTGTTGAACTTCCAAAGCAAAACCTTTGGCACTGAGACTCTTCAGGAGCTGATGGCAATGAAATCTAAATGGGACTTGAAGGGTCCAAACAGCCCAAAAATCACTGTGTTGCTGAACCACTTCAAGAGAAAGACACTCTGTGCTCAGCTTGATTCTTTGCTCCAACAGACCCTTCCTTTCCATCATGCTTGGGTTCTTTCATTTGGGAGCCCCAATGAGGCCTCGTTGAGGAGAATTGTGGAGACCTATAATGACTCAAGAATCAGCTTCATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACTGAAGCTGATCTTGTGTATGTTATTGATGATGACATGATTCCTGGAAGGAAGATGTTGCAGATTTTGGCGCACGTGGCTGGGACAGAAAAATACAAGAATTCTGTTTTGGGGAGTATTGGAAGGATTTTGCCTTTTAGACAGAAGGATTTCACGTTTCCAAGTTACAGAAAATTTCGATCTAAGGAGGCAGGGTTGTATTTACCCGATCCTGCTTATGATATCACAGTTGATAAAATTGTGCAGGTGGATTTTCTGTCTAGTTCATGGTTTCTCTCTGCTGATCTTGTTAAGACACTATTCACTGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCACCTCAGCTATCAGCTTCAGAAGTACAAAAATGCTGGCTCCTTTGTTCTTCCAGTGGACCCTAAGGACAAGGAAACTTGGGGAGATAGTGAACACAGGCTTGCATATGTATCTGAAACCACAGTGATTTTCAAGGACGTAGTTCAGGTCAGAGATGATCAATGGTGGAAAGCACTTTCCACTGGCTATGTGACTCAGTGGGCTGCAATGTACCCACAAAAAGTTGATGCACTCTTCTATGCTCACTCAGTTGATGAAGTGAAAGTGCTGGCACCACTTCTTGAAAAGTTCAGGTCCACAGTTGGCAAGAAGGCCTACATTGTTGTCTCTGGAGGCAGTTTCTGCACTTGTGAAGATGTTGCAACAGTTCTCAAATGGCCTACAATGGTCTGCAAAGAACGTCGATTCAAGATTTTTGATTTGGCCATTGGATCACTTTCTGGGGTATCAGACTCAGAGGCACCAGTGATACATGCAGTGTACACCAGCATGAAGGGTTTGATCAAAATTCACAACCCCAGTGTAGTGATCACTGTTGCTGACATTAACCCTCATGTGAGAAAAGCTCTTAAGATGGCCTCAGAAACCAACTCAAATGCCACCACATTGGTTCTTTTACCCAGGGCATCAGTGTCTCAAGTTCTCTGGATGGCTGATCTGCGTTCAACAGCATTACCAAATTGGAATCGGATGAGGGTTTCAGTGAACATCATCACCCAAAACAGAGCCAATTCACTAACAAGGCTTCTGAAATCTCTAAGCAATGCCTACTATCTTGGAGATGAAATTCCCATTACCTTCAACATGGATAGCAGGGTAGATGAGGAAACTATAAGACTAGTAGGTTCATTTGAGTGGCCTCATGGACCCAAAACCCTGAGAAGGAGAATAATCCAAGGTGGTCTCATTCGTGCTGTGAGTGAAAGCTGGTATCCATCATCAGATGATGACTTTGGTCTCCTCCTAGAAGATGACATTGAAGTTTCCCCTTACTACTACCTATGGATCAAGTATGCACTCATGGCTTACCACTATGACCCTCAAGTTTCTCTCCCTGAACTCTCCTCCATCTCCCTCTACACCCCAAAGCTTGTTGAAGTTGTCAAAGAGAGACCAAAATGGAATGCCACAGAATTCTTCAAACACATTCACCCCAACACTCCTTACCTACACCAATTACCATGCAGCTGGGGGGCAGTGTTCTTCCCCAAGCATTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCCAAATCCAACCCTGTTCAAATTCCAAAATCTAGAACCAATGGATGGCAAGCTTCATGGAAGAAGTTCCTGATAGACATGATGTACCTCAGAGGGTATGTCAGTCTCTACCCAAATTTCCCTCAACAAGCAAGCTTTTCAACCAACCATATGGAGCCAGGAGCACATATCAGTGCAAAAGACAACGTTGTTAAGCACAACAAACAGGACTTTGAGGTGCCGCTATTGAAAGAAGACTTCAGAAACTTGTTGCCAGCAATGAAGATGCCTCCAGCATCAAAGCTTCCATCTTTAAACCTCTTCAATCAACCAGTTTCTCTGAAGGGTCTCAAAGCTGCTGGAGCTAAGCTGGGACAGGATGTGCTAAGATGCAACAATGCCACTGAGGTTGTGGCTGTTGATCAACACACGGGTCTACCTCGTACCTGCTCCAAATTCTGA 2802 0.4411 MGFGRTSTSSRSGECLEGMLSDYVGGRNKVKAQKGSSTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVVGHYQEAASSLVMEGVLPTNPSQVCENEKIDFQQKKSNDVQMIKIKRELYDEVLNFQSKTFGTETLQELMAMKSKWDLKGPNSPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHAWVLSFGSPNEASLRRIVETYNDSRISFISSSYDFKYYGRFQMALQTEADLVYVIDDDMIPGRKMLQILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFTETPFTFSTGEDLHLSYQLQKYKNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDVVQVRDDQWWKALSTGYVTQWAAMYPQKVDALFYAHSVDEVKVLAPLLEKFRSTVGKKAYIVVSGGSFCTCEDVATVLKWPTMVCKERRFKIFDLAIGSLSGVSDSEAPVIHAVYTSMKGLIKIHNPSVVITVADINPHVRKALKMASETNSNATTLVLLPRASVSQVLWMADLRSTALPNWNRMRVSVNIITQNRANSLTRLLKSLSNAYYLGDEIPITFNMDSRVDEETIRLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPELSSISLYTPKLVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKSNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLLKEDFRNLLPAMKMPPASKLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCNNATEVVAVDQHTGLPRTCSKF 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01920 933 CDD Glyco_tranf_GTA_type 189 280 - -
Viun11g01920 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 600 848 IPR029044 -
Viun11g01920 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 597 788 IPR029044 -
Viun11g01920 933 PANTHER OSJNBA0004B13.7 PROTEIN 281 924 - -
Viun11g01920 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 177 377 IPR029044 -
Viun11g01920 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 160 386 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01920 Viun-Chr11 35067065 35071747 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01920 - - gsj:114374559 1764.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01920 11 35067065 35071747 Viun11g01920 11 35067065 35071747 ECH