Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01917 ATGGCCGGCAAAGGTGGAGCGACTCCGGCGACGTATTCGCCATCTCCGACAGCCGATAGAAAGAAACCACCGTTTTTTAAGGAAGATTGGGTTCGGCCGGATGGCCGCGGTTTCCACCAGTGCAGACCTGCATTTTTCAGGACTGGTGCTGTGAATGCAGCATCTGGATCTGCATATGCTGAGTTTGGAAATACCAAGGTCATTGTATCTGTATTTGGGCCAAGAGAGAGCAAGAAGGCAATGATGTACAGTGATATAGGGCGTTTGAATTGCAATGTCAGCTTTACAACGTTTGCAACTCCAGTACGAGGGCAGGGTTCAGACCACAAAGAGTACACTGCGATGCTTAATAAAGCTTTAGAAGGTGCAATAATACTGGAAAGTTTCCCCAAGACAACTGTGGATGTTTTTGCATTGGTGCTAGAATCTAGCGGCAGTGATCTCCCAGTTGTCATATCCTGTGCTAGCCTTGCCCTGGCGGATGCTGGAATAATGATGTATGATCTTGTTGCCTCGGTTTCTGTGTCAAGCTTTAGTAAGAACCTTATCATTGATCCTATTCTGGAGGAGGAAAACTCCCAAGATGGTAGCTTAATGATTACATGCATGCCTTCTCGCTATGAAATCACCCAACTCACCGTTACCGGGGAATGGTCTTCCCCGAAGATCAACGAGGGAATGCAGCTGTGCTTGGATGCTTGTGCAAAGCTAGCGAAGATTATGAGATCATGTTTGAAAGAAGCTGCTTCGGATTCCAGGGAGTAA 765 0.4706 MAGKGGATPATYSPSPTADRKKPPFFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPVRGQGSDHKEYTAMLNKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSSFSKNLIIDPILEEENSQDGSLMITCMPSRYEITQLTVTGEWSSPKINEGMQLCLDACAKLAKIMRSCLKEAASDSRE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01917 254 Gene3D - 19 253 IPR027408 -
Viun11g01917 254 MobiDBLite consensus disorder prediction 1 26 - -
Viun11g01917 254 Pfam 3' exoribonuclease family, domain 2 168 228 IPR015847 -
Viun11g01917 254 PANTHER EXOSOME COMPLEX COMPONENT 32 245 - -
Viun11g01917 254 SUPERFAMILY Ribonuclease PH domain 2-like 166 250 IPR036345 -
Viun11g01917 254 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Viun11g01917 254 FunFam Exosome complex component RRP41-like 13 250 - -
Viun11g01917 254 CDD RNase_PH_MTR3 41 247 - -
Viun11g01917 254 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 195 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01917 Viun-Chr11 35026534 35031401 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01917 K12587 - gmx:100819105 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01917 11 35026534 35031401 Viun11g01917 11 35026534 35031401 ECH