Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01881 ATGAGCAATTCTCACTCTGAAAATCATGATGAAGCAACTGTGGTGGGATTTGAAGTTCCAAAATCACCTGAATCCAGTTACAACAATGTCTACCCTGGAAATGAAGATGAAGCAAGGGATCCGCCTATGGTGCCTTCACATTTGCAACACACTTTGCTCAATTATCATTCTACCAGAGACACTGCAGGAACAGTTCCATTGCCTCAGAATGTGATTCTAAATCATCTTTACATCGAGAATAGAGAGTCCCCAAGATCTGTGGTGGCTTTGGGATTCACTCATCGTTTCCGTTCTAAATATGTTACAGTCGTGCTTTACAAACCAGTCCAAAGAAGGGGAAATACAGGTGTTTAA 354 0.4153 MSNSHSENHDEATVVGFEVPKSPESSYNNVYPGNEDEARDPPMVPSHLQHTLLNYHSTRDTAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFRSKYVTVVLYKPVQRRGNTGV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01881 117 Gene3D - 13 109 - -
Viun11g01881 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 4 111 IPR043554 -
Viun11g01881 117 SMART AMPKBI_2 20 109 IPR006828 GO:0005515
Viun11g01881 117 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 38 108 IPR006828 GO:0005515
Viun11g01881 117 MobiDBLite consensus disorder prediction 1 49 - -
Viun11g01881 117 SUPERFAMILY AMPKBI-like 12 109 IPR037256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01881 Viun-Chr11 34679948 34682732 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01881 - - gmx:102661902 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01881 11 34679948 34682732 Viun11g01881 11 34679948 34682732 ECH