Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01860 ATGGCATGTTCATTACCCTTCTCCAAACTCTCTCTGTTGCTTTTGTTCGCATCACTTTCATTTTCCTATGCAACTTCTCGCCACCCTGCATTCCCACCACAATCATCAAAAGCAGAAAGACTCATAAGAAGCTTTAACCTATTCCCGAAGGAACCCTTCAACACCATCCAAGAACTTCACCACCTTCATACTTTTGTCCCTGGTCAGATCGTAGAGACCAACTTCTCGTTTCTCGGTGCTTCTGGGCCTCCTGTTGAAGACCTTGGTCACCATGCAGGCTATTATTCACTTCCTCATTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCACGAAAGAACAAGAATGATCCCGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGAAGTGAATTAGCTTTGTTCTACGAAAACGGTCCTTTTCATATCATCAACAACTTGTCTCTTACATGGAATGATTACGGCTGGGATCAGGCATCGAATATTATATTTGTTGACCAACCAACTGGGACAGGTTTTAGTTACTCTTCTGATAAAAGTGACATTCGCCCCGATGAAACTGGCGTTAGCAATGATTTATATGATTTCTTGCAGGCGTTTTTCAAGGCTCATCCTGAGTTTGTTAAGAATGATTTCTATATCACTGGAGAATCATACGCCGGACACTATATTCCTGCAATTGCTTCACTGATTAACCAAAACAATAAAAAGAAACAAGGAATCCATATAAACCTCAAGGGTTTTGCGATTGGTAATGGGTTAACAAATTCTCCGATTCAATACGAAGTATACCCAGAATTTGCGTTACAGAACGGACTAATTACGAAGAAGGAGGCAGATGATATCAGCAAGTTAATCCCAGACTGTGACAAAACCGCTAAAGCCTGCGAATCTCGTGGTGGGAAGGTTTGTGAGGATGCATTAGATGCTTGTGAAGCCATTTTCGATAAATTATTGTCTATTGTCGGTGATCTTAACTACTACGACATTCGAAAAAAATGTCTGGGACCTTTGTGCTATGACTACAGCAACGTGGAGAAGTTGTTAAACGAGGAGAAAGTGAAGAGTGCTTTAGGTGTGGGGAAGGGGTTGAAGTATGTTTCGTGCAGTCGAACAGTGTATGATGCTATGCTGCAAGACACGATGAAAAATCTGGAAGTGGGGATTCCTGGTCTTCTTGAGGATGGGATAAGGTTTCTTGCGTATGCTGGGGAAAAGGATCTCATATGCAATTGGCTTGGGAATTTAAGGTGGATCAATGCCATGAACTGGTCAGGCCAAAAGGGTTTTGAGGCATCTCCTACAGTGAAATTTGTGGTTGATGGTGCAGAATCAGGGACTCTAAACAGCCATGGACCTCTCTCTTTCCTCAAGGTGCATGATGCTGGGCACATGGTACCTATGGATCAACCAAAAGTTGCATTAGAGATGTTGAAAAGGTGGATGGGAGGAAAACTGATGAACCCAACACCAGATAATTAG 1488 0.4261 MACSLPFSKLSLLLLFASLSFSYATSRHPAFPPQSSKAERLIRSFNLFPKEPFNTIQELHHLHTFVPGQIVETNFSFLGASGPPVEDLGHHAGYYSLPHSKAARMFYFFFESRKNKNDPVVIWLTGGPGCGSELALFYENGPFHIINNLSLTWNDYGWDQASNIIFVDQPTGTGFSYSSDKSDIRPDETGVSNDLYDFLQAFFKAHPEFVKNDFYITGESYAGHYIPAIASLINQNNKKKQGIHINLKGFAIGNGLTNSPIQYEVYPEFALQNGLITKKEADDISKLIPDCDKTAKACESRGGKVCEDALDACEAIFDKLLSIVGDLNYYDIRKKCLGPLCYDYSNVEKLLNEEKVKSALGVGKGLKYVSCSRTVYDAMLQDTMKNLEVGIPGLLEDGIRFLAYAGEKDLICNWLGNLRWINAMNWSGQKGFEASPTVKFVVDGAESGTLNSHGPLSFLKVHDAGHMVPMDQPKVALEMLKRWMGGKLMNPTPDN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01860 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 177 IPR001563 GO:0004185|GO:0006508
Viun11g01860 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 166 IPR001563 GO:0004185|GO:0006508
Viun11g01860 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 456 469 IPR001563 GO:0004185|GO:0006508
Viun11g01860 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Viun11g01860 495 FunFam Carboxypeptidase 78 495 - -
Viun11g01860 495 SUPERFAMILY alpha/beta-Hydrolases 88 488 IPR029058 -
Viun11g01860 495 Pfam Serine carboxypeptidase 87 485 IPR001563 GO:0004185|GO:0006508
Viun11g01860 495 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
Viun11g01860 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 67 473 IPR001563 GO:0004185|GO:0006508
Viun11g01860 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 456 473 IPR033124 GO:0004185
Viun11g01860 495 Gene3D alpha/beta hydrolase 80 492 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01860 Viun-Chr11 34544219 34547159 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01860 K16298 - gmx:100798795 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01860 11 34544219 34547159 Viun11g01860 11 34544219 34547159 ECH