Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01833 ATGGCACTCCCGCACTCCATCTCTGCGTTATCAACCACACTCACGCTTTCCTCCTCAGTGAACAAACCCACTACCAACAAAGTGAATTCCTTTCCCTTCTTGTCGAACAAGGGCACGCAATTTTTCACGAAACAAACTCGACCCAGAAGCGGAAGAAGCCCCTTGCTTACCCCTGCACGCGTTGCGGCGCCACCCTCAACGGTTGAAACCGATCAATCGTTCCCTGAAACGGAAAAGGGGGAGACTGAAGAAGAGTTTAACGAGGAGAGCTCTTCCTCGAAGTTCACCTGGAGGGATCACTGGTACCCTGTTTCGTTAATTGAGGATCTGAACCCTCTCTTACCCACTCCGTTTCAGCTTCTGGGTCGTGAAATCGTCCTCTGGTACGACAAGTCCACTTCCCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTATCAGAAGGAAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTACCATGGGTGGTCTTTTGATGGTTGTGGATCTTGTGTCAAGATTCCTCAGGCTGCATCTGAAGGTCCAGAAGCACGTGCTGTTGGATCTCCTAAAGCGTGTGCCACTAGGTTCCCTACTCTAGTGTCTCAGGGATTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCAAGTGCCTCCAAGCCTCCAATGTTGCCTGATGAGTTTGAAAAACCGGAGTTTGCCACTGTCAATATTCAGCGTGATCTGTTCTATGGTTACGATACTCTAATGGAGAATGTCTCTGATCCTTCTCACATTGAGTTTGCTCATCACAAGGTCACAGGAAGGAGAGACAGAGCCAAGCCTCTGCCATTCAAGATGGATGCTCGTGGTTCATGGGGCTTCTCTGGGGCAAATGAAGGGAACCCTAAGATCAGTGCCAAATTTGTTGCACCTTGTTACTATATGAACAAGATTGAGATTGATACCAAACTCCCTGTAGTTGGTGACCAGAAATGGGTTGTGTGGATATGTTCCTTCAATGTCCCCATGGCACCTGGTAAGACTCGCTCCATAGTTTGCAGTGCTCGAAACTTCTTCCAGTTCACAGTGCCAGGGCCTGCCTGGTGGCAAGTAGTTCCTAGATGGTATGAGCATTGGACTTCGAACAAGGTATATGATGGAGACATGATAGTCCTTCAAGGCCAAGAGAAAATCTTCCTTTCAAAAACCAAGGAAGGAGATGACATTAACAAACAGTACACCAGCATCACCTTCACACCAACTCAGGCAGATCGCTTTGTCTTGGCATTTCGAAACTGGCTCAGGCGACATGGCAATGGCCAACCAGAATGGTTTAGCAGCATCACCGACCTGCCATTGCCATCAACAGTTTTATCCAAACGTGAGATGTTGGATAGATTAGAACAGCATACTCTGAAGTGTTCATCGTGTAAAGAAGCTTATGAGGGATTCCAAATATGGCAGAAAGTCCTAATTGGTGCAACAGTTATATTTTGTGCAACATCAGGGATTCCAGCAGATGTCCAGTTTCGTGTTCTTTTGGCTGGACTTGCAATTGTCAGCGCCGCCTTAGCTTTTACCCTAAACCAGCTCCAAAAGAATTTTGAATTTGTCGATTACGTGCATGCAGAAATCGAATGA 1644 0.4708 MALPHSISALSTTLTLSSSVNKPTTNKVNSFPFLSNKGTQFFTKQTRPRSGRSPLLTPARVAAPPSTVETDQSFPETEKGETEEEFNEESSSSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSTSQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAVGSPKACATRFPTLVSQGLLFVWPDENGWEKASASKPPMLPDEFEKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHKVTGRRDRAKPLPFKMDARGSWGFSGANEGNPKISAKFVAPCYYMNKIEIDTKLPVVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSKTKEGDDINKQYTSITFTPTQADRFVLAFRNWLRRHGNGQPEWFSSITDLPLPSTVLSKREMLDRLEQHTLKCSSCKEAYEGFQIWQKVLIGATVIFCATSGIPADVQFRVLLAGLAIVSAALAFTLNQLQKNFEFVDYVHAEIE 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01833 547 SUPERFAMILY Bet v1-like 208 442 - -
Viun11g01833 547 Gene3D - 240 442 - -
Viun11g01833 547 Gene3D - 96 239 IPR036922 GO:0051537
Viun11g01833 547 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 40 493 - -
Viun11g01833 547 CDD Rieske_RO_Alpha_PaO 94 224 - -
Viun11g01833 547 MobiDBLite consensus disorder prediction 74 91 - -
Viun11g01833 547 MobiDBLite consensus disorder prediction 42 91 - -
Viun11g01833 547 Pfam Pheophorbide a oxygenase 309 404 IPR013626 GO:0010277
Viun11g01833 547 Pfam Rieske [2Fe-2S] domain 100 183 IPR017941 GO:0051537
Viun11g01833 547 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 101 213 IPR017941 GO:0051537
Viun11g01833 547 SUPERFAMILY ISP domain 94 219 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01833 Viun-Chr11 34376424 34380983 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01833 K13071 - gmx:778121 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01833 11 34376424 34380983 Viun11g01833 11 34376424 34380983 ECH